(27 nodes) Mixed, incl. G0 and Early G1, and Recombination endonuclease VII network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG23762	Protein CBG23762. (1175 aa)
	CBG24201	Protein CBG24201. (627 aa)
	CBG24840	Protein CBG24840. (466 aa)
	dpl-1	Protein CBR-DPL-1. (603 aa)
	lin-54	Protein CBR-LIN-54. (419 aa)
	CBG01899	Protein CBG01899. (108 aa)
	lin-35	Protein CBR-LIN-35. (956 aa)
	CBG05187	Protein CBG05187. (687 aa)
	lin-9	Protein CBR-LIN-9. (641 aa)
	CBG08916	Protein CBG08916. (878 aa)
	lin-52	Protein CBR-LIN-52. (162 aa)
	CBG15088	Protein CBG15088. (691 aa)
	CBG15878	Protein CBG15878. (345 aa)
	CBG16380	Protein CBG16380. (607 aa)
	lin-37	Protein CBR-LIN-37. (274 aa)
	CBG18598	Protein CBG18598. (56 aa)
	efl-1	Protein CBR-EFL-1. (303 aa)
	CBG18874	Protein CBG18874. (624 aa)
	CBG20137	Protein CBG20137. (1034 aa)
	CBG21154	Protein CBG21154. (740 aa)
	CBG22294	Protein CBG22294. (260 aa)
	lin-36	Protein CBR-LIN-36. (1111 aa)
	CBG26674	Protein CBG26674. (312 aa)
	CBG27013	Protein CBG27013. (229 aa)
	CBG25359	Protein CBG25359. (864 aa)
	CBG25936	Protein CBG25936. (545 aa)
	lin-53	Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription. (416 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG01899	lin-53	A8WRJ0	Q61Y48	Protein CBG01899.	Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription.	0.459
CBG01899	lin-54	A8WRJ0	A8WQS4	Protein CBG01899.	Protein CBR-LIN-54.	0.472
CBG05187	CBG24840	A8WZC1	A8WLM1	Protein CBG05187.	Protein CBG24840.	0.536
CBG05187	CBG26674	A8WZC1	B6IE44	Protein CBG05187.	Protein CBG26674.	0.527
CBG05187	lin-53	A8WZC1	Q61Y48	Protein CBG05187.	Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription.	0.459
CBG05187	lin-54	A8WZC1	A8WQS4	Protein CBG05187.	Protein CBR-LIN-54.	0.472
CBG08916	lin-53	A8X7P2	Q61Y48	Protein CBG08916.	Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription.	0.459
CBG08916	lin-54	A8X7P2	A8WQS4	Protein CBG08916.	Protein CBR-LIN-54.	0.472
CBG15088	CBG24840	A8XLC9	A8WLM1	Protein CBG15088.	Protein CBG24840.	0.539
CBG15088	CBG26674	A8XLC9	B6IE44	Protein CBG15088.	Protein CBG26674.	0.530
CBG15088	lin-53	A8XLC9	Q61Y48	Protein CBG15088.	Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription.	0.459
CBG15088	lin-54	A8XLC9	A8WQS4	Protein CBG15088.	Protein CBR-LIN-54.	0.472
CBG15878	CBG24840	A8XMU2	A8WLM1	Protein CBG15878.	Protein CBG24840.	0.534
CBG15878	CBG26674	A8XMU2	B6IE44	Protein CBG15878.	Protein CBG26674.	0.526
CBG16380	lin-53	A8XNK1	Q61Y48	Protein CBG16380.	Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription.	0.459
CBG16380	lin-54	A8XNK1	A8WQS4	Protein CBG16380.	Protein CBR-LIN-54.	0.472
CBG18598	dpl-1	A8XTN9	A8WPA6	Protein CBG18598.	Protein CBR-DPL-1.	0.845
CBG18598	lin-35	A8XTN9	A8WW47	Protein CBG18598.	Protein CBR-LIN-35.	0.844
CBG18598	lin-52	A8XTN9	A8XA37	Protein CBG18598.	Protein CBR-LIN-52.	0.606
CBG18598	lin-53	A8XTN9	Q61Y48	Protein CBG18598.	Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription.	0.501