STRINGSTRING
sorf-2 sorf-2 mtm-3 mtm-3 mtm-1 mtm-1 sorf-1 sorf-1 mtm-5 mtm-5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sorf-2Protein CBG24676. (1417 aa)
mtm-3Protein CBR-MTM-3. (1008 aa)
mtm-1Protein CBR-MTM-1. (590 aa)
sorf-1Protein CBG14197. (239 aa)
mtm-5Protein CBR-MTM-5. (1776 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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