STRINGSTRING
ssl-1 ssl-1 CBG00498 CBG00498 CBG03742 CBG03742 CBG03744 CBG03744 ruvb-2 ruvb-2 zhit-1 zhit-1 CBG12344 CBG12344 arp-6 arp-6 CBG16527 CBG16527 ruvb-1 ruvb-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ssl-1Protein CBR-SSL-1. (1964 aa)
CBG00498Protein CBG00498. (911 aa)
CBG03742Protein CBG03742. (264 aa)
CBG03744Protein CBG03744. (126 aa)
ruvb-2RuvB-like helicase; Belongs to the RuvB family. (447 aa)
zhit-1Protein CBR-ZHIT-1. (196 aa)
CBG12344Protein CBG12344. (242 aa)
arp-6Protein CBR-ARP-6; Belongs to the actin family. (418 aa)
CBG16527Protein CBG16527. (316 aa)
ruvb-1RuvB-like helicase; Belongs to the RuvB family. (478 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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