(16 nodes) Mixed, incl. Protein tyrosine phosphatase, catalytic domain, and Protein of unknown function DUF829, TMEM53 network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ptp-5.3	Protein CBG02314. (479 aa)
	CBG04149	Protein CBG04149. (189 aa)
	gska-3	Protein CBR-GSKA-3. (365 aa)
	CBG03803	Tyrosine-protein kinase. (473 aa)
	CBG07970	Protein CBG07970. (527 aa)
	CBG09230	Protein CBG09230. (627 aa)
	wht-5	Protein CBR-WHT-5. (655 aa)
	dhs-14.1	Protein CBR-DHS-14. (280 aa)
	CBG12665	Protein CBG12665. (236 aa)
	CBG13495	Protein CBG13495. (468 aa)
	CBG18331	Protein CBG18331. (476 aa)
	CBG17973	Protein CBG17973. (543 aa)
	CBG19305	Protein CBG19305. (97 aa)
	CBG20434	Protein CBG20434. (403 aa)
	CBG20941	Protein CBG20941. (470 aa)
	CBG21032	Protein CBG21032. (526 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG03803	CBG07970	A8WWS2	A8X5H3	Tyrosine-protein kinase.	Protein CBG07970.	0.893
CBG03803	CBG17973	A8WWS2	A8XSQ2	Tyrosine-protein kinase.	Protein CBG17973.	0.882
CBG03803	CBG18331	A8WWS2	A8XSG2	Tyrosine-protein kinase.	Protein CBG18331.	0.695
CBG03803	CBG20941	A8WWS2	A8XZ03	Tyrosine-protein kinase.	Protein CBG20941.	0.695
CBG03803	CBG21032	A8WWS2	A8XZ78	Tyrosine-protein kinase.	Protein CBG21032.	0.695
CBG03803	ptp-5.3	A8WWS2	A8WUL9	Tyrosine-protein kinase.	Protein CBG02314.	0.695
CBG04149	CBG09230	A8WWA2	A8X8A5	Protein CBG04149.	Protein CBG09230.	0.681
CBG04149	CBG12665	A8WWA2	A8XGA4	Protein CBG04149.	Protein CBG12665.	0.630
CBG04149	CBG13495	A8WWA2	A8XI09	Protein CBG04149.	Protein CBG13495.	0.682
CBG04149	CBG18331	A8WWA2	A8XSG2	Protein CBG04149.	Protein CBG18331.	0.475
CBG04149	CBG19305	A8WWA2	A8XVB3	Protein CBG04149.	Protein CBG19305.	0.647
CBG04149	CBG20434	A8WWA2	A8XXS8	Protein CBG04149.	Protein CBG20434.	0.590
CBG04149	CBG20941	A8WWA2	A8XZ03	Protein CBG04149.	Protein CBG20941.	0.475
CBG04149	CBG21032	A8WWA2	A8XZ78	Protein CBG04149.	Protein CBG21032.	0.475
CBG04149	dhs-14.1	A8WWA2	A8XET8	Protein CBG04149.	Protein CBR-DHS-14.	0.700
CBG04149	ptp-5.3	A8WWA2	A8WUL9	Protein CBG04149.	Protein CBG02314.	0.475
CBG04149	wht-5	A8WWA2	A8XE09	Protein CBG04149.	Protein CBR-WHT-5.	0.689
CBG07970	CBG03803	A8X5H3	A8WWS2	Protein CBG07970.	Tyrosine-protein kinase.	0.893
CBG07970	CBG17973	A8X5H3	A8XSQ2	Protein CBG07970.	Protein CBG17973.	0.888
CBG07970	CBG18331	A8X5H3	A8XSG2	Protein CBG07970.	Protein CBG18331.	0.646