STRINGSTRING
mcrs-1 mcrs-1 CBG08774 CBG08774 ogt-1 ogt-1 hcf-1 hcf-1 mys-2 mys-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mcrs-1Protein CBG08716. (519 aa)
CBG08774Protein CBG08774. (1075 aa)
ogt-1Protein CBR-OGT-1. (1184 aa)
hcf-1Protein CBR-HCF-1. (771 aa)
mys-2Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (583 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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