STRINGSTRING
CBG23729 CBG23729 CBG23899 CBG23899 CBG24504 CBG24504 CBG00127 CBG00127 ensh-1 ensh-1 del-3 del-3 del-4 del-4 unc-105 unc-105 acd-4 acd-4 del-10 del-10 eif-2d eif-2d CBG03517 CBG03517 CBG04870 CBG04870 CBG04873 CBG04873 ech-2 ech-2 unc-8 unc-8 acd-3 acd-3 del-1 del-1 del-6 del-6 degt-1 degt-1 ech-3 ech-3 acd-5 acd-5 asic-1 asic-1 acd-2 acd-2 mec-6 mec-6 del-9 del-9 mec-18 mec-18 CBG14703 CBG14703 CBG14831 CBG14831 del-8 del-8 mec-5 mec-5 CBG15980 CBG15980 sto-5 sto-5 mec-14 mec-14 sto-6 sto-6 del-5 del-5 mec-17 mec-17 del-7 del-7 mec-1 mec-1 mec-9 mec-9 del-2 del-2 mec-12 mec-12 egas-2 egas-2 clp-1 clp-1 CBG27387 CBG27387 mec-4 mec-4 mec-10 mec-10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG23729Protein CBG23729. (287 aa)
CBG23899Protein CBG23899; Belongs to the small heat shock protein (HSP20) family. (184 aa)
CBG24504Protein CBG24504. (288 aa)
CBG00127Protein CBG00127. (273 aa)
ensh-1Protein CBG00249. (497 aa)
del-3Protein CBR-DEL-3; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (489 aa)
del-4Protein CBR-DEL-4; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (426 aa)
unc-105Protein CBR-UNC-105; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (816 aa)
acd-4Protein CBG01465; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (587 aa)
del-10Protein CBG02656; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (906 aa)
eif-2dProtein CBG02479. (548 aa)
CBG03517Protein CBG03517. (224 aa)
CBG04870Protein CBG04870; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (682 aa)
CBG04873Protein CBG04873; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (664 aa)
ech-2Protein CBR-ECH-2. (283 aa)
unc-8Protein CBR-UNC-8; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (834 aa)
acd-3Protein CBR-TAG-324; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (433 aa)
del-1Protein CBR-DEL-1; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (659 aa)
del-6Protein CBG09644; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (581 aa)
degt-1Protein CBG09634; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (824 aa)
ech-3Protein CBR-ECH-3; Belongs to the enoyl-CoA hydratase/isomerase family. (271 aa)
acd-5Protein CBG11983; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (650 aa)
asic-1Protein CBR-ASIC-1; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (842 aa)
acd-2Protein CBG12068; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (736 aa)
mec-6Protein CBR-MEC-6. (376 aa)
del-9Protein CBG14244; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (602 aa)
mec-18Protein CBR-MEC-18. (639 aa)
CBG14703Protein CBG14703. (1196 aa)
CBG14831Protein CBG14831. (465 aa)
del-8Protein CBR-TAG-263; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (554 aa)
mec-5Protein CBR-MEC-5. (327 aa)
CBG15980Protein CBG15980. (114 aa)
sto-5Protein CBR-STO-5. (334 aa)
mec-14Protein CBR-MEC-14. (452 aa)
sto-6Protein CBR-STO-6. (298 aa)
del-5Protein CBG17520; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (480 aa)
mec-17Alpha-tubulin N-acetyltransferase 1; Specifically acetylates 'Lys-40' in alpha-tubulin/mec-12 on the lumenal side of microtubules. Promotes microtubule destabilization and accelerates microtubule dynamics; this activity may be independent of acetylation activity. Acetylates alpha-tubulin with a slow enzymatic rate, due to a catalytic site that is not optimized for acetyl transfer. Enters the microtubule through each end and diffuses quickly throughout the lumen of microtubules. Acetylates only long/old microtubules because of its slow acetylation rate since it does not have time to act [...] (277 aa)
del-7Protein CBG17665; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (545 aa)
mec-1Protein CBR-MEC-1. (2101 aa)
mec-9Protein CBR-MEC-9. (920 aa)
del-2Protein CBR-DEL-2. (616 aa)
mec-12Protein CBR-MEC-12; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (611 aa)
egas-2Protein CBR-TAG-336. (527 aa)
clp-1Protein CBR-CLP-1; Belongs to the peptidase C2 family. (938 aa)
CBG27387Protein CBG27387; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (142 aa)
mec-4Degenerin mec-4; Probable sodium channel subunit. May be needed for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. (768 aa)
mec-10Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. (724 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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