(35 nodes) ETS family, and c4 zinc finger in nuclear hormone receptors network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG24391	Protein CBG24391. (130 aa)
	CBG00835	Protein CBG00835. (208 aa)
	CBG00836	Protein CBG00836. (85 aa)
	CBG01338	Protein CBG01338. (345 aa)
	nhr-55	Protein CBR-NHR-55. (217 aa)
	nhr-16	Protein CBG01395. (366 aa)
	unc-39	Protein CBR-UNC-39. (315 aa)
	CBG04783	Protein CBG04783. (352 aa)
	nhr-30	Protein CBR-NHR-30. (395 aa)
	ceh-28	Protein CBR-CEH-28. (100 aa)
	nhr-131.1	Protein CBR-NHR-131. (267 aa)
	CBG06503	Protein CBG06503. (327 aa)
	CBG06625	Protein CBG06625. (246 aa)
	CBG06735	Protein CBG06735. (276 aa)
	nhr-26	Protein CBR-NHR-26. (358 aa)
	CBG08820	Protein CBG08820. (157 aa)
	CBG08835	Protein CBG08835. (153 aa)
	nhr-192	Protein CBG10264. (352 aa)
	ets-8	Protein CBR-ETS-8. (169 aa)
	ets-5	Protein CBR-ETS-5. (155 aa)
	CBG16291	Protein CBG16291. (347 aa)
	CBG16982	Protein CBG16982. (435 aa)
	hlh-10	Protein CBR-HLH-10. (271 aa)
	CBG19535	Protein CBG19535. (464 aa)
	CBG19536	Protein CBG19536. (384 aa)
	npax-4	Protein CBR-NPAX-4. (218 aa)
	nhr-38	Protein CBR-NHR-38. (331 aa)
	CBG22857	Protein CBG22857. (272 aa)
	CBG22881	Protein CBG22881. (271 aa)
	CBG22888	Protein CBG22888. (296 aa)
	Cbr-nhr-283	Protein CBR-NHR-283. (330 aa)
	CBG25628	Protein CBG25628. (134 aa)
	CBG27350	Protein CBG27350. (263 aa)
	CBG20719	Protein CBG20719. (81 aa)
	Cbr-pax-2	Protein CBR-PAX-2, isoform a. (304 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG00835	CBG01338	A8WNY5	A8WQ63	Protein CBG00835.	Protein CBG01338.	0.509
CBG00835	CBG04783	A8WNY5	A8WYG6	Protein CBG00835.	Protein CBG04783.	0.540
CBG00835	CBG06503	A8WNY5	A8X2D7	Protein CBG00835.	Protein CBG06503.	0.489
CBG00835	CBG06625	A8WNY5	A8X2P7	Protein CBG00835.	Protein CBG06625.	0.551
CBG00835	CBG06735	A8WNY5	A8X2Z1	Protein CBG00835.	Protein CBG06735.	0.552
CBG00835	CBG16291	A8WNY5	A8XNQ6	Protein CBG00835.	Protein CBG16291.	0.537
CBG00835	CBG16982	A8WNY5	A8XQ70	Protein CBG00835.	Protein CBG16982.	0.548
CBG00835	CBG19535	A8WNY5	A8XVU5	Protein CBG00835.	Protein CBG19535.	0.534
CBG00835	CBG19536	A8WNY5	A8XVU6	Protein CBG00835.	Protein CBG19536.	0.521
CBG00835	CBG20719	A8WNY5	E3CU80	Protein CBG00835.	Protein CBG20719.	0.544
CBG00835	CBG22857	A8WNY5	A8Y381	Protein CBG00835.	Protein CBG22857.	0.545
CBG00835	CBG22881	A8WNY5	A8Y3A3	Protein CBG00835.	Protein CBG22881.	0.554
CBG00835	CBG22888	A8WNY5	A8Y3B0	Protein CBG00835.	Protein CBG22888.	0.551
CBG00835	CBG24391	A8WNY5	A8WKL7	Protein CBG00835.	Protein CBG24391.	0.539
CBG00835	CBG27350	A8WNY5	B6IGF1	Protein CBG00835.	Protein CBG27350.	0.548
CBG00835	Cbr-nhr-283	A8WNY5	A8Y3C0	Protein CBG00835.	Protein CBR-NHR-283.	0.488
CBG00835	Cbr-pax-2	A8WNY5	H8WGW9	Protein CBG00835.	Protein CBR-PAX-2, isoform a.	0.683
CBG00835	ceh-28	A8WNY5	A8WZF2	Protein CBG00835.	Protein CBR-CEH-28.	0.531
CBG00835	hlh-10	A8WNY5	A8XV62	Protein CBG00835.	Protein CBR-HLH-10.	0.560
CBG00835	nhr-131.1	A8WNY5	A8X242	Protein CBG00835.	Protein CBR-NHR-131.	0.539