(12 nodes) Mixed, incl. PBC domain, and Homeobox protein, antennapedia type, conserved site network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	unc-62	Homeobox protein unc-62; Acts redundantly with ceh-20 and ceh-40 to perform overlapping roles during embryogenesis. Required for postembryonic development of the ectoderm, including the Q, V and P cell lineages, playing a crucial role in ensuring that these cells and their descendants undergo their invariant patterns of cell division, migration, fusion and morphogenesis. Has a role in the mig-13 pathway to promote anterior migration of neuroblasts in the Q lineage. Required for multiple roles in regulating vulva development (By similarity). Belongs to the TALE/MEIS homeobox family. (725 aa)
	egl-5	Protein CBR-EGL-5. (184 aa)
	CBG00043	Protein CBG00043. (163 aa)
	vrp-1	Protein CBG03360. (174 aa)
	ceh-40	Protein CBG05292. (312 aa)
	ceh-13	Protein CBR-CEH-13. (202 aa)
	ceh-60	Protein CBR-CEH-60. (386 aa)
	ceh-20	Protein CBR-CEH-20. (338 aa)
	CBG17526	Protein CBG17526. (436 aa)
	php-3	Protein CBR-PHP-3. (269 aa)
	mab-5	Protein CBR-MAB-5. (202 aa)
	lin-39	Protein CBR-LIN-39. (253 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG00043	ceh-20	A8WM72	A8XPC3	Protein CBG00043.	Protein CBR-CEH-20.	0.594
CBG00043	ceh-40	A8WM72	A8WZJ8	Protein CBG00043.	Protein CBG05292.	0.594
CBG00043	ceh-60	A8WM72	A8XC37	Protein CBG00043.	Protein CBR-CEH-60.	0.594
CBG00043	egl-5	A8WM72	A8WM58	Protein CBG00043.	Protein CBR-EGL-5.	0.854
CBG00043	lin-39	A8WM72	Q9GZ04	Protein CBG00043.	Protein CBR-LIN-39.	0.841
CBG00043	php-3	A8WM72	A8Y3E5	Protein CBG00043.	Protein CBR-PHP-3.	0.583
CBG00043	unc-62	A8WM72	A8WL06	Protein CBG00043.	Homeobox protein unc-62; Acts redundantly with ceh-20 and ceh-40 to perform overlapping roles during embryogenesis. Required for postembryonic development of the ectoderm, including the Q, V and P cell lineages, playing a crucial role in ensuring that these cells and their descendants undergo their invariant patterns of cell division, migration, fusion and morphogenesis. Has a role in the mig-13 pathway to promote anterior migration of neuroblasts in the Q lineage. Required for multiple roles in regulating vulva development (By similarity). Belongs to the TALE/MEIS homeobox family.	0.640
CBG17526	ceh-20	A8XRD8	A8XPC3	Protein CBG17526.	Protein CBR-CEH-20.	0.582
CBG17526	ceh-40	A8XRD8	A8WZJ8	Protein CBG17526.	Protein CBG05292.	0.582
CBG17526	ceh-60	A8XRD8	A8XC37	Protein CBG17526.	Protein CBR-CEH-60.	0.582
ceh-13	ceh-20	A8X878	A8XPC3	Protein CBR-CEH-13.	Protein CBR-CEH-20.	0.878
ceh-13	ceh-40	A8X878	A8WZJ8	Protein CBR-CEH-13.	Protein CBG05292.	0.721
ceh-13	ceh-60	A8X878	A8XC37	Protein CBR-CEH-13.	Protein CBR-CEH-60.	0.625
ceh-13	php-3	A8X878	A8Y3E5	Protein CBR-CEH-13.	Protein CBR-PHP-3.	0.533
ceh-13	unc-62	A8X878	A8WL06	Protein CBR-CEH-13.	Homeobox protein unc-62; Acts redundantly with ceh-20 and ceh-40 to perform overlapping roles during embryogenesis. Required for postembryonic development of the ectoderm, including the Q, V and P cell lineages, playing a crucial role in ensuring that these cells and their descendants undergo their invariant patterns of cell division, migration, fusion and morphogenesis. Has a role in the mig-13 pathway to promote anterior migration of neuroblasts in the Q lineage. Required for multiple roles in regulating vulva development (By similarity). Belongs to the TALE/MEIS homeobox family.	0.495
ceh-20	CBG00043	A8XPC3	A8WM72	Protein CBR-CEH-20.	Protein CBG00043.	0.594
ceh-20	CBG17526	A8XPC3	A8XRD8	Protein CBR-CEH-20.	Protein CBG17526.	0.582
ceh-20	ceh-13	A8XPC3	A8X878	Protein CBR-CEH-20.	Protein CBR-CEH-13.	0.878
ceh-20	egl-5	A8XPC3	A8WM58	Protein CBR-CEH-20.	Protein CBR-EGL-5.	0.807
ceh-20	lin-39	A8XPC3	Q9GZ04	Protein CBR-CEH-20.	Protein CBR-LIN-39.	0.898