(15 nodes) Ether lipid metabolism, and Phosphatidylserine biosynthetic process network (Caenorhabditis briggsae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	psd-1	Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily. (348 aa)
	ipla-2	Protein CBG01902. (1072 aa)
	pssy-1	Protein CBR-PSSY-1. (501 aa)
	CBG02732	Phospholipase A(2). (151 aa)
	pld-1	Phospholipase. (1402 aa)
	cept-2	Protein CBG04633; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (424 aa)
	ipla-3	Protein CBG05582. (1062 aa)
	CBG06931	Protein CBG06931. (1334 aa)
	CBG10776	1-alkyl-2-acetylglycerophosphocholine esterase. (381 aa)
	mboa-6	Protein CBG11740; Belongs to the membrane-bound acyltransferase family. (475 aa)
	paf-2	1-alkyl-2-acetylglycerophosphocholine esterase. (388 aa)
	pssy-2	Protein CBR-PSSY-2. (508 aa)
	CBG19099	Protein CBG19099. (674 aa)
	CBG21934	Protein CBG21934. (414 aa)
	CBG22523	Phospholipase A(2). (154 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG02732	CBG06931	A8WTM4	A8X3E1	Phospholipase A(2).	Protein CBG06931.	0.901
CBG02732	CBG10776	A8WTM4	A8XBS1	Phospholipase A(2).	1-alkyl-2-acetylglycerophosphocholine esterase.	0.907
CBG02732	CBG19099	A8WTM4	A8XUS6	Phospholipase A(2).	Protein CBG19099.	0.900
CBG02732	CBG21934	A8WTM4	A8Y168	Phospholipase A(2).	Protein CBG21934.	0.909
CBG02732	CBG22523	A8WTM4	A8Y2G9	Phospholipase A(2).	Phospholipase A(2).	0.962
CBG02732	cept-2	A8WTM4	A8WY41	Phospholipase A(2).	Protein CBG04633; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.901
CBG02732	ipla-2	A8WTM4	A8WRJ3	Phospholipase A(2).	Protein CBG01902.	0.923
CBG02732	ipla-3	A8WTM4	A8X073	Phospholipase A(2).	Protein CBG05582.	0.923
CBG02732	paf-2	A8WTM4	A8XJW4	Phospholipase A(2).	1-alkyl-2-acetylglycerophosphocholine esterase.	0.907
CBG02732	pld-1	A8WTM4	A8WUL4	Phospholipase A(2).	Phospholipase.	0.900
CBG02732	psd-1	A8WTM4	A8WK25	Phospholipase A(2).	Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.	0.900
CBG02732	pssy-1	A8WTM4	A8WRN4	Phospholipase A(2).	Protein CBR-PSSY-1.	0.900
CBG02732	pssy-2	A8WTM4	A8XLX9	Phospholipase A(2).	Protein CBR-PSSY-2.	0.900
CBG06931	CBG02732	A8X3E1	A8WTM4	Protein CBG06931.	Phospholipase A(2).	0.901
CBG06931	CBG21934	A8X3E1	A8Y168	Protein CBG06931.	Protein CBG21934.	0.926
CBG06931	CBG22523	A8X3E1	A8Y2G9	Protein CBG06931.	Phospholipase A(2).	0.901
CBG06931	ipla-2	A8X3E1	A8WRJ3	Protein CBG06931.	Protein CBG01902.	0.906
CBG06931	ipla-3	A8X3E1	A8X073	Protein CBG06931.	Protein CBG05582.	0.906
CBG06931	mboa-6	A8X3E1	A8XDU4	Protein CBG06931.	Protein CBG11740; Belongs to the membrane-bound acyltransferase family.	0.900
CBG10776	CBG02732	A8XBS1	A8WTM4	1-alkyl-2-acetylglycerophosphocholine esterase.	Phospholipase A(2).	0.907