(28 nodes) Phosphatidylcholine biosynthetic process, and CRAL/TRIO, N-terminal domain superfamily network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ctg-1	Protein CBR-CTG-1. (383 aa)
	cept-1	Protein CBR-CEPT-1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (394 aa)
	CBG00479	Protein CBG00479. (389 aa)
	ckb-2.1	Protein CBR-CKB-2. (370 aa)
	CBG02523	Protein CBG02523. (396 aa)
	pmt-1	Protein CBR-PMT-1. (482 aa)
	ept-1	Protein CBG03950. (393 aa)
	CBG05149	Protein CBG05149. (273 aa)
	cha-1	Protein CBR-CHA-1; Belongs to the carnitine/choline acetyltransferase family. (636 aa)
	pmt-2	Protein CBR-PMT-2. (437 aa)
	ckb-4	Protein CBR-CKB-4. (385 aa)
	CBG10061	Protein CBG10061. (383 aa)
	CBG10148	Protein CBG10148. (703 aa)
	gpcp-2	Protein CBG13338. (805 aa)
	ckc-1	Protein CBR-CKC-1. (342 aa)
	cka-2	Protein CBR-CKA-2. (435 aa)
	ace-2	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (629 aa)
	pcyt-1	Protein CBR-PCYT-1. (349 aa)
	pcyt-2.2	Protein CBG16841. (347 aa)
	CBG16955	Protein CBG16955. (204 aa)
	ckb-2.2	Protein CBG18080. (368 aa)
	eppl-1	Protein CBG18478; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (467 aa)
	CBG20506	Protein CBG20506. (271 aa)
	pcyt-2.1	Protein CBG22040. (355 aa)
	CBG23168	Protein CBG23168. (394 aa)
	CBG25970	Protein CBG25970. (162 aa)
	ace-1	Acetylcholinesterase 1; Rapidly hydrolyzes choline released into the synapse; Belongs to the type-B carboxylesterase/lipase family. (620 aa)
	ace-4	Acetylcholinesterase 4; Rapidly hydrolyzes choline released into the synapse. (604 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG00479	CBG05149	A8WMR5	A8WZ58	Protein CBG00479.	Protein CBG05149.	0.940
CBG00479	CBG16955	A8WMR5	A8XQ50	Protein CBG00479.	Protein CBG16955.	0.940
CBG00479	ace-1	A8WMR5	Q27459	Protein CBG00479.	Acetylcholinesterase 1; Rapidly hydrolyzes choline released into the synapse; Belongs to the type-B carboxylesterase/lipase family.	0.900
CBG00479	ace-2	A8WMR5	A8XL40	Protein CBG00479.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.900
CBG00479	ace-4	A8WMR5	Q9NDG8	Protein CBG00479.	Acetylcholinesterase 4; Rapidly hydrolyzes choline released into the synapse.	0.900
CBG00479	cha-1	A8WMR5	A8X694	Protein CBG00479.	Protein CBR-CHA-1; Belongs to the carnitine/choline acetyltransferase family.	0.900
CBG00479	ckc-1	A8WMR5	A8XJK5	Protein CBG00479.	Protein CBR-CKC-1.	0.483
CBG00479	eppl-1	A8WMR5	A8XTE5	Protein CBG00479.	Protein CBG18478; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.901
CBG00479	gpcp-2	A8WMR5	A8XHL9	Protein CBG00479.	Protein CBG13338.	0.906
CBG00479	pcyt-1	A8WMR5	A8XPQ3	Protein CBG00479.	Protein CBR-PCYT-1.	0.940
CBG00479	pcyt-2.1	A8WMR5	A8Y1E2	Protein CBG00479.	Protein CBG22040.	0.943
CBG00479	pcyt-2.2	A8WMR5	A8XPX3	Protein CBG00479.	Protein CBG16841.	0.455
CBG00479	pmt-2	A8WMR5	A8X7D2	Protein CBG00479.	Protein CBR-PMT-2.	0.922
CBG05149	CBG00479	A8WZ58	A8WMR5	Protein CBG05149.	Protein CBG00479.	0.940
CBG05149	CBG10061	A8WZ58	A8XAA5	Protein CBG05149.	Protein CBG10061.	0.940
CBG05149	CBG16955	A8WZ58	A8XQ50	Protein CBG05149.	Protein CBG16955.	0.901
CBG05149	CBG25970	A8WZ58	B6IKS0	Protein CBG05149.	Protein CBG25970.	0.429
CBG05149	cept-1	A8WZ58	A8WM92	Protein CBG05149.	Protein CBR-CEPT-1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.953
CBG05149	cka-2	A8WZ58	A8XJW3	Protein CBG05149.	Protein CBR-CKA-2.	0.940
CBG05149	ckb-2.1	A8WZ58	A8WMR6	Protein CBG05149.	Protein CBR-CKB-2.	0.940