STRINGSTRING
CBG05362 CBG05362 lag-1 lag-1 lin-12.2 lin-12.2 CBG06829 CBG06829 sel-12 sel-12 hop-1 hop-1 sup-17 sup-17 pen-2 pen-2 aph-2 aph-2 aph-1 aph-1 spe-4 spe-4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG05362Protein CBG05362. (1336 aa)
lag-1Protein CBR-LAG-1. (681 aa)
lin-12.2Protein CBR-LIN-12. (1392 aa)
CBG06829Protein CBG06829. (987 aa)
sel-12Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (450 aa)
hop-1Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (358 aa)
sup-17Protein CBR-SUP-17. (920 aa)
pen-2Protein CBR-PEN-2. (101 aa)
aph-2Protein CBR-APH-2. (721 aa)
aph-1Protein CBR-APH-1. (330 aa)
spe-4Protein CBR-SPE-4. (483 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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