STRINGSTRING
clec-186 clec-186 CBG01061 CBG01061 ttr-51 ttr-51 CBG02858 CBG02858 CBG02857 CBG02857 clec-63 clec-63 clec-62 clec-62 clec-173 clec-173 irg-3 irg-3 asp-6 asp-6 asp-5 asp-5 clec-150 clec-150 spp-8 spp-8 nhr-37 nhr-37 clec-145 clec-145 spp-23 spp-23 clec-65 clec-65
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
clec-186Protein CBR-CLEC-186. (346 aa)
CBG01061Protein CBG01061. (209 aa)
ttr-51Protein CBR-TTR-51. (138 aa)
CBG02858Protein CBG02858. (183 aa)
CBG02857Protein CBG02857. (185 aa)
clec-63Protein CBR-CLEC-63. (415 aa)
clec-62Protein CBR-CLEC-62. (393 aa)
clec-173Protein CBG05726. (516 aa)
irg-3Protein CBR-IRG-3. (227 aa)
asp-6Protein CBR-ASP-6; Belongs to the peptidase A1 family. (389 aa)
asp-5Protein CBR-ASP-5; Belongs to the peptidase A1 family. (394 aa)
clec-150Protein CBR-CLEC-150. (319 aa)
spp-8Protein CBR-SPP-8. (439 aa)
nhr-37Protein CBR-NHR-37. (417 aa)
clec-145Protein CBG20755. (410 aa)
spp-23Protein CBR-SPP-23. (104 aa)
clec-65Protein CBG25517. (342 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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