STRINGSTRING
hrg-6 hrg-6 hrg-4 hrg-4 mics-1 mics-1 hmit-1.1 hmit-1.1 CBG15077 CBG15077 CBG22453 CBG22453 hrg-2.2 hrg-2.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hrg-6Protein CBG05990. (161 aa)
hrg-4Protein CBG05989. (172 aa)
mics-1Protein CBR-MICS-1. (292 aa)
hmit-1.1Protein CBG12921; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (510 aa)
CBG15077Protein CBG15077. (454 aa)
CBG22453Protein CBG22453. (463 aa)
hrg-2.2Protein CBR-CDR-5. (279 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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