STRINGSTRING
sfxn-5 sfxn-5 CBG00805 CBG00805 ftn-1 ftn-1 sfxn-1.2 sfxn-1.2 sfxn-1.4 sfxn-1.4 CBG06567 CBG06567 fpn-1.2 fpn-1.2 CBG10409 CBG10409 smf-2 smf-2 smf-1 smf-1 ftn-2 ftn-2 smf-3 smf-3 CBG16448 CBG16448 sfxn-1.5 sfxn-1.5 atad-3 atad-3 fpn-1.1 fpn-1.1 CBG13317 CBG13317
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sfxn-5Protein CBR-SFXN-5. (593 aa)
CBG00805Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (78 aa)
ftn-1Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family. (170 aa)
sfxn-1.2Sidoreflexin. (329 aa)
sfxn-1.4Sidoreflexin. (326 aa)
CBG06567Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (468 aa)
fpn-1.2Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (500 aa)
CBG10409Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (408 aa)
smf-2Protein CBR-SMF-2. (545 aa)
smf-1Protein CBR-SMF-1. (577 aa)
ftn-2Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family. (170 aa)
smf-3Protein CBR-SMF-3. (560 aa)
CBG16448Protein CBG16448. (739 aa)
sfxn-1.5Sidoreflexin. (324 aa)
atad-3Protein CBR-ATAD-3. (596 aa)
fpn-1.1Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (499 aa)
CBG13317Protein CBG13317. (257 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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