STRINGSTRING
CBG00964 CBG00964 aagr-4 aagr-4 uggt-1 uggt-1 aagr-3 aagr-3 uggt-2 uggt-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG00964Protein CBG00964. (506 aa)
aagr-4Protein CBG08162; Belongs to the glycosyl hydrolase 31 family. (920 aa)
uggt-1Protein CBG16703. (1495 aa)
aagr-3Protein CBG19359; Belongs to the glycosyl hydrolase 31 family. (924 aa)
uggt-2Protein CBG22023. (1280 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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