STRINGSTRING
nstp-5 nstp-5 CBG00477 CBG00477 lec-8 lec-8 hst-3.2 hst-3.2 hst-3.1 hst-3.1 tpst-1 tpst-1 sqv-5 sqv-5 sdn-1 sdn-1 rib-1 rib-1 CBG06099 CBG06099 CBG06098 CBG06098 mig-22 mig-22 nstp-4 nstp-4 pst-1 pst-1 sqv-3 sqv-3 sqv-7 sqv-7 CBG12710 CBG12710 hst-6 hst-6 CBG16528 CBG16528 hst-2 hst-2 nlp-66 nlp-66 nstp-9 nstp-9 hse-5 hse-5 kal-1 kal-1 CBG19078 CBG19078 nstp-10 nstp-10 Cbr-sqv-2 Cbr-sqv-2 CBG23225 CBG23225 sqv-8 sqv-8 hst-1 hst-1 pst-2 pst-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nstp-5Protein CBR-NSTP-5. (398 aa)
CBG00477Protein CBG00477. (381 aa)
lec-8Galectin. (180 aa)
hst-3.2Protein CBR-HST-3.2. (289 aa)
hst-3.1Protein CBR-HST-3.1. (271 aa)
tpst-1Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. (377 aa)
sqv-5Hexosyltransferase. (766 aa)
sdn-1Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (298 aa)
rib-1Protein CBR-RIB-1; Belongs to the glycosyltransferase 47 family. (343 aa)
CBG06099Protein CBG06099; Belongs to the histidine acid phosphatase family. (514 aa)
CBG06098Protein CBG06098. (514 aa)
mig-22Hexosyltransferase. (804 aa)
nstp-4Protein CBR-NSTP-4. (349 aa)
pst-1Protein CBR-PST-1. (441 aa)
sqv-3Protein CBR-SQV-3. (285 aa)
sqv-7Protein CBR-SQV-7. (328 aa)
CBG12710Protein CBG12710. (336 aa)
hst-6Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (379 aa)
CBG16528Protein CBG16528. (678 aa)
hst-2Protein CBR-HST-2. (368 aa)
nlp-66Protein CBG17432. (95 aa)
nstp-9Protein CBR-NSTP-9. (315 aa)
hse-5Protein CBR-HSE-5. (618 aa)
kal-1Protein CBR-KAL-1. (711 aa)
CBG19078Protein CBG19078. (606 aa)
nstp-10Protein CBR-NSTP-10. (349 aa)
Cbr-sqv-2Protein CBR-SQV-2. (562 aa)
CBG23225Protein CBG23225. (791 aa)
sqv-8Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (356 aa)
hst-1Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1; Essential bifunctional enzyme that catalyzes both the N- deacetylation and the N-sulfation of glucosamine (GlcNAc) of the glycosaminoglycan in heparan sulfate. Modifies the GlcNAc-GlcA disaccharide repeating sugar backbone to make N-sulfated heparosan, a prerequisite substrate for later modifications in heparin biosynthesis (By similarity); Belongs to the sulfotransferase 1 family. NDST subfamily. (859 aa)
pst-2Adenosine 3'-phospho 5'-phosphosulfate transporter 2; Mediates the transport of adenosine 3'-phospho 5'- phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi (By similarity); Belongs to the nucleotide-sugar transporter family. SLC35B subfamily. (363 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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