STRINGSTRING
snf-12 snf-12 nlp-34.1 nlp-34.1 nlp-27 nlp-27 nlp-34.2 nlp-34.2 nlp-34.3 nlp-34.3 CBG01367 CBG01367 tpa-1 tpa-1 CBG03606 CBG03606 CBG03609 CBG03609 tir-1 tir-1 CBG03616 CBG03616 dcar-1 dcar-1 cnc-5.2 cnc-5.2 cnc-5.1 cnc-5.1 cnc-4 cnc-4 nipi-3 nipi-3 nlp-32 nlp-32 sta-2 sta-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
snf-12Protein CBR-SNF-12. (1003 aa)
nlp-34.1Protein CBR-NLP-34.1. (62 aa)
nlp-27Protein CBR-NLP-27. (70 aa)
nlp-34.2Protein CBR-NLP-34.2. (59 aa)
nlp-34.3Protein CBR-NLP-34.3. (59 aa)
CBG01367Protein CBG01367. (67 aa)
tpa-1Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (705 aa)
CBG03606Protein CBG03606. (414 aa)
CBG03609Protein CBG03609. (174 aa)
tir-1Protein CBR-TIR-1. (585 aa)
CBG03616Protein CBG03616. (379 aa)
dcar-1Protein CBR-DCAR-1. (398 aa)
cnc-5.2Protein CBR-CNC-5.2. (64 aa)
cnc-5.1Protein CBR-CNC-5.1. (64 aa)
cnc-4Protein CBR-CNC-4. (67 aa)
nipi-3Protein CBR-NIPI-3. (650 aa)
nlp-32Protein CBR-NLP-32. (89 aa)
sta-2Protein CBR-STA-2. (771 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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