(58 nodes) Mixed, incl. Lipase (class 3), and STELLO-like network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG23826	Protein CBG23826. (377 aa)
	clec-187	Protein CBR-CLEC-187. (295 aa)
	CBG24379	Protein CBG24379. (344 aa)
	CBG24380	Protein CBG24380. (344 aa)
	CBG00815	Protein CBG00815. (133 aa)
	CBG01090	Protein CBG01090. (278 aa)
	CBG01120	Protein CBG01120. (735 aa)
	CBG01487	Protein CBG01487. (1165 aa)
	CBG01603	Protein CBG01603. (127 aa)
	CBG02598	Protein CBG02598. (443 aa)
	CBG02522	Protein CBG02522. (343 aa)
	CBG02308	Protein CBG02308. (815 aa)
	CBG04422	Protein CBG04422. (203 aa)
	CBG04627	Protein CBG04627. (410 aa)
	lec-11	Galectin. (233 aa)
	CBG06402	Protein CBG06402. (1108 aa)
	CBG06945	Protein CBG06945. (1522 aa)
	CBG07778	Protein CBG07778. (334 aa)
	srt-61	Protein CBR-SRT-61. (346 aa)
	CBG08841	Protein CBG08841. (353 aa)
	nono-1	Protein CBR-PSF-1. (529 aa)
	CBG09205	Protein CBG09205. (370 aa)
	twk-12	TWiK family of potassium channels protein 12. (687 aa)
	nlp-36	Protein CBR-NLP-36. (81 aa)
	CBG10128	Protein CBG10128. (362 aa)
	CBG10305	Protein CBG10305. (250 aa)
	CBG10411	Protein CBG10411. (765 aa)
	CBG10829	Protein CBG10829. (305 aa)
	hpx-2	Protein CBG11467. (718 aa)
	CBG11750	Protein CBG11750. (329 aa)
	CBG11730	Protein CBG11730. (284 aa)
	CBG11685	Protein CBG11685. (238 aa)
	asic-2	Protein CBR-ASIC-2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (534 aa)
	CBG12141	Protein CBG12141. (336 aa)
	CBG12171	Protein CBG12171. (424 aa)
	aman-3	Alpha-mannosidase. (1084 aa)
	clec-172.1	Protein CBG13557. (155 aa)
	clec-172.2	Protein CBR-CLEC-172. (153 aa)
	CBG13893	Protein CBG13893. (339 aa)
	CBG13892	Protein CBG13892. (339 aa)
	clec-265	Protein CBR-CLEC-265. (321 aa)
	CBG16394	Protein CBG16394. (364 aa)
	CBG17601	Protein CBG17601; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (572 aa)
	clec-125.1	Protein CBG17757. (251 aa)
	cpt-6	Protein CBR-CPT-6; Belongs to the carnitine/choline acetyltransferase family. (761 aa)
	nas-3	Metalloendopeptidase. (301 aa)
	CBG20017	Protein CBG20017. (108 aa)
	CBG20607	Protein CBG20607. (342 aa)
	CBG20683	Protein CBG20683. (450 aa)
	CBG21149	Protein CBG21149. (144 aa)
	CBG21150	Protein CBG21150. (440 aa)
	CBG21148	Protein CBG21148. (277 aa)
	CBG21853	Protein CBG21853. (284 aa)
	clec-221	Protein CBR-CLEC-221. (192 aa)
	CBG00587	Protein CBG00587. (444 aa)
	CBG26892	Protein CBG26892. (193 aa)
	CBG25939	Protein CBG25939. (83 aa)
	CBG08110	Protein CBG08110. (360 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG00587	CBG01120	B0K058	A8WPL7	Protein CBG00587.	Protein CBG01120.	0.621
CBG00587	CBG01487	B0K058	A8WQK7	Protein CBG00587.	Protein CBG01487.	0.665
CBG00587	CBG02308	B0K058	A8WUM5	Protein CBG00587.	Protein CBG02308.	0.669
CBG00587	CBG06945	B0K058	A8X3F3	Protein CBG00587.	Protein CBG06945.	0.643
CBG00587	CBG09205	B0K058	A8X8C7	Protein CBG00587.	Protein CBG09205.	0.674
CBG00587	CBG10128	B0K058	A8XAG3	Protein CBG00587.	Protein CBG10128.	0.630
CBG00587	CBG21148	B0K058	A8XZD6	Protein CBG00587.	Protein CBG21148.	0.633
CBG00587	CBG21149	B0K058	A8XZD4	Protein CBG00587.	Protein CBG21149.	0.448
CBG00587	CBG21150	B0K058	A8XZD5	Protein CBG00587.	Protein CBG21150.	0.448
CBG00587	nono-1	B0K058	A8X7Z1	Protein CBG00587.	Protein CBR-PSF-1.	0.530
CBG00815	CBG04422	A8WNW6	A8WXI0	Protein CBG00815.	Protein CBG04422.	0.777
CBG00815	CBG10305	A8WNW6	A8XAN1	Protein CBG00815.	Protein CBG10305.	0.532
CBG00815	CBG12171	A8WNW6	A8XEX2	Protein CBG00815.	Protein CBG12171.	0.520
CBG00815	CBG20017	A8WNW6	A8XWY1	Protein CBG00815.	Protein CBG20017.	0.830
CBG00815	CBG21853	A8WNW6	A8Y0Z5	Protein CBG00815.	Protein CBG21853.	0.505
CBG00815	aman-3	A8WNW6	A8XFK8	Protein CBG00815.	Alpha-mannosidase.	0.502
CBG00815	clec-125.1	A8WNW6	A8XRQ7	Protein CBG00815.	Protein CBG17757.	0.562
CBG00815	clec-187	A8WNW6	A8WKK4	Protein CBG00815.	Protein CBR-CLEC-187.	0.562
CBG00815	clec-221	A8WNW6	A8Y4T1	Protein CBG00815.	Protein CBR-CLEC-221.	0.562
CBG01120	CBG00587	A8WPL7	B0K058	Protein CBG01120.	Protein CBG00587.	0.621