STRINGSTRING
CBG23794 CBG23794 CBG00196 CBG00196 mct-1 mct-1 slcf-1 slcf-1 CBG05646 CBG05646 mct-3 mct-3 CBG09600 CBG09600 CBG14081 CBG14081 CBG14523 CBG14523 mct-4 mct-4 mct-6 mct-6 CBG18081 CBG18081 lrx-1 lrx-1 CBG27435 CBG27435
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG23794Solute carrier organic anion transporter family member. (706 aa)
CBG00196Solute carrier organic anion transporter family member. (769 aa)
mct-1Protein CBG01116. (530 aa)
slcf-1Protein CBR-SLCF-1. (450 aa)
CBG05646Protein CBG05646. (459 aa)
mct-3Protein CBG07361. (621 aa)
CBG09600Solute carrier organic anion transporter family member. (763 aa)
CBG14081Solute carrier organic anion transporter family member. (806 aa)
CBG14523Solute carrier organic anion transporter family member. (664 aa)
mct-4Protein CBR-PES-22. (783 aa)
mct-6Protein CBG16244. (592 aa)
CBG18081Protein CBG18081. (858 aa)
lrx-1Protein CBR-LRX-1. (365 aa)
CBG27435Protein CBG27435. (114 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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