STRINGSTRING
igeg-1 igeg-1 CBG01733 CBG01733 CBG01732 CBG01732 ptp-2 ptp-2 CBG04133 CBG04133 CBG04490 CBG04490 shc-1 shc-1 sli-1 sli-1 CBG08394 CBG08394 CBG10300 CBG10300 kin-32 kin-32 CBG14649 CBG14649 Cbr-tag-83 Cbr-tag-83 tns-1 tns-1 cdap-2 cdap-2 vav-1 vav-1 sem-5 sem-5 CBG19279 CBG19279 src-1 src-1 CBG23363 CBG23363 CBG04143 CBG04143 sos-1 sos-1 rol-3 rol-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
igeg-1Protein CBG01840. (270 aa)
CBG01733Protein CBG01733. (299 aa)
CBG01732Protein CBG01732. (549 aa)
ptp-2Protein CBR-PTP-2. (692 aa)
CBG04133Protein CBG04133. (444 aa)
CBG04490Protein CBG04490. (696 aa)
shc-1Protein CBR-SHC-1. (317 aa)
sli-1Protein CBR-SLI-1. (546 aa)
CBG08394Protein CBG08394. (463 aa)
CBG10300Protein CBG10300. (675 aa)
kin-32Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family. (865 aa)
CBG14649Protein CBG14649. (894 aa)
Cbr-tag-83Protein CBR-TAG-83. (244 aa)
tns-1Protein CBR-TAG-163. (938 aa)
cdap-2Protein CBG14969. (544 aa)
vav-1Protein CBR-VAV-1. (971 aa)
sem-5Protein CBR-SEM-5. (229 aa)
CBG19279Protein CBG19279. (293 aa)
src-1Tyrosine-protein kinase. (544 aa)
CBG23363Protein CBG23363. (206 aa)
CBG04143Protein CBG04143. (713 aa)
sos-1Protein CBR-SOS-1. (339 aa)
rol-3Protein roller-3; Involved in larval development and locomotion. (2439 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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