STRINGSTRING
svh-1 svh-1 mlk-1 mlk-1 ets-4 ets-4 svh-2 svh-2 CBG12574 CBG12574
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
svh-1Protein CBR-TRY-2; Belongs to the peptidase S1 family. (921 aa)
mlk-1Protein CBR-MLK-1. (1091 aa)
ets-4Protein CBR-ETS-4. (450 aa)
svh-2Protein CBG10839; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1120 aa)
CBG12574Protein CBG12574. (307 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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