STRINGSTRING
xpf-1 xpf-1 ercc-1 ercc-1 msh-2 msh-2 xpg-1 xpg-1 msh-6 msh-6 mlh-1 mlh-1 csb-1 csb-1 gen-1 gen-1 xpa-1 xpa-1 CBG21674 CBG21674 pms-2 pms-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xpf-1Protein CBG03141. (927 aa)
ercc-1Protein CBR-ERCC-1. (251 aa)
msh-2Protein CBR-MSH-2. (847 aa)
xpg-1Protein CBR-XPG-1. (880 aa)
msh-6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1194 aa)
mlh-1Protein CBR-MLH-1. (761 aa)
csb-1Protein CBR-CSB-1. (1015 aa)
gen-1Protein CBR-GEN-1. (424 aa)
xpa-1Protein CBR-XPA-1. (241 aa)
CBG21674Protein CBG21674. (171 aa)
pms-2Protein CBR-PMS-2. (838 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.