(20 nodes) Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase, and Spindle checkpoint signaling network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fzr-1	Protein CBR-FZR-1. (708 aa)
	emb-27	Protein CBR-EMB-27. (669 aa)
	mat-2	Protein CBR-MAT-2. (1853 aa)
	fzy-1	Protein CBR-FZY-1. (521 aa)
	CBG03913	Protein CBG03913. (215 aa)
	gfi-3	Protein CBR-GFI-3. (794 aa)
	apc-10	Protein CBR-APC-10. (144 aa)
	bub-1	Protein CBR-BUB-1. (971 aa)
	mat-1	Protein CBR-MAT-1. (746 aa)
	CBG12075	Protein CBG12075. (611 aa)
	mat-3	Protein CBR-MAT-3. (667 aa)
	san-1	Protein CBR-SAN-1. (390 aa)
	such-1	Protein CBR-SUCH-1. (769 aa)
	CBG13581	Protein CBG13581. (651 aa)
	mdf-2	Protein CBR-MDF-2. (203 aa)
	CBG15203	Protein CBG15203. (648 aa)
	apc-11	Protein CBR-APC-11. (134 aa)
	mdf-1	Protein CBR-MDF-1. (681 aa)
	bub-3	Protein CBR-BUB-3. (342 aa)
	apc-2	Protein CBR-APC-2; Belongs to the cullin family. (700 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG03913	CBG12075	A8WVQ9	A8XEH7	Protein CBG03913.	Protein CBG12075.	0.746
CBG03913	CBG13581	A8WVQ9	A8XI85	Protein CBG03913.	Protein CBG13581.	0.962
CBG03913	CBG15203	A8WVQ9	A8XLP3	Protein CBG03913.	Protein CBG15203.	0.961
CBG03913	apc-10	A8WVQ9	A8X8N7	Protein CBG03913.	Protein CBR-APC-10.	0.904
CBG03913	apc-11	A8WVQ9	A8XSV6	Protein CBG03913.	Protein CBR-APC-11.	0.995
CBG03913	apc-2	A8WVQ9	A8Y3J3	Protein CBG03913.	Protein CBR-APC-2; Belongs to the cullin family.	0.995
CBG03913	bub-1	A8WVQ9	A8XA01	Protein CBG03913.	Protein CBR-BUB-1.	0.746
CBG03913	bub-3	A8WVQ9	A8XYE4	Protein CBG03913.	Protein CBR-BUB-3.	0.617
CBG03913	emb-27	A8WVQ9	A8WN71	Protein CBG03913.	Protein CBR-EMB-27.	0.995
CBG03913	fzr-1	A8WVQ9	A8WLM4	Protein CBG03913.	Protein CBR-FZR-1.	0.927
CBG03913	fzy-1	A8WVQ9	A8WUD1	Protein CBG03913.	Protein CBR-FZY-1.	0.984
CBG03913	gfi-3	A8WVQ9	A8X4N7	Protein CBG03913.	Protein CBR-GFI-3.	0.988
CBG03913	mat-1	A8WVQ9	A8XBW2	Protein CBG03913.	Protein CBR-MAT-1.	0.995
CBG03913	mat-2	A8WVQ9	A8WT36	Protein CBG03913.	Protein CBR-MAT-2.	0.995
CBG03913	mat-3	A8WVQ9	A8XG47	Protein CBG03913.	Protein CBR-MAT-3.	0.961
CBG03913	mdf-2	A8WVQ9	A8XJ48	Protein CBG03913.	Protein CBR-MDF-2.	0.941
CBG03913	san-1	A8WVQ9	A8XG59	Protein CBG03913.	Protein CBR-SAN-1.	0.746
CBG03913	such-1	A8WVQ9	A8XHG1	Protein CBG03913.	Protein CBR-SUCH-1.	0.957
CBG12075	CBG03913	A8XEH7	A8WVQ9	Protein CBG12075.	Protein CBG03913.	0.746
CBG12075	CBG13581	A8XEH7	A8XI85	Protein CBG12075.	Protein CBG13581.	0.723