STRINGSTRING
ubc-1 ubc-1 CBG24536 CBG24536 CBG24537 CBG24537 CBG24538 CBG24538 ubc-24 ubc-24 CBG00875 CBG00875 ubc-25 ubc-25 uba-1 uba-1 let-70 let-70 ubc-14 ubc-14 ubq-1 ubq-1 ubc-7 ubc-7 otub-1 otub-1 CBG12102 CBG12102 chn-1 chn-1 ubc-6 ubc-6 ubc-13 ubc-13 ubc-8 ubc-8 ubc-21 ubc-21 ubc-22 ubc-22 ubc-20 ubc-20 ubq-2 ubq-2 ubc-18 ubc-18 uev-3 uev-3 uev-1 uev-1 ubc-16 ubc-16 ari-1.1 ari-1.1 ubc-19 ubc-19 CBG21481 CBG21481 ubc-3 ubc-3 CBG27979 CBG27979 herc-1 herc-1 rfp-1 rfp-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ubc-1Protein CBR-UBC-1; Belongs to the ubiquitin-conjugating enzyme family. (205 aa)
CBG24536Protein CBG24536. (118 aa)
CBG24537Protein CBG24537. (266 aa)
CBG24538Protein CBG24538. (438 aa)
ubc-24Protein CBR-UBC-24. (158 aa)
CBG00875Protein CBG00875. (171 aa)
ubc-25Protein CBR-UBC-25. (389 aa)
uba-1Protein CBR-UBA-1; Belongs to the ubiquitin-activating E1 family. (1114 aa)
let-70Protein CBR-LET-70; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
ubc-14Protein CBR-UBC-14; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
ubq-1Protein CBR-UBQ-1. (770 aa)
ubc-7Protein CBR-UBC-7; Belongs to the ubiquitin-conjugating enzyme family. (164 aa)
otub-1Ubiquitin thioesterase otubain-like; Hydrolase that can remove conjugated ubiquitin from proteins and plays an important regulatory role at the level of protein turnover by preventing degradation. Specifically cleaves 'Lys-48'-linked polyubiquitin (By similarity); Belongs to the peptidase C65 family. (288 aa)
CBG12102Protein CBG12102. (186 aa)
chn-1Protein CBR-CHN-1. (266 aa)
ubc-6Protein CBR-UBC-6. (317 aa)
ubc-13Protein CBR-UBC-13; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
ubc-8Protein CBR-UBC-8; Belongs to the ubiquitin-conjugating enzyme family. (261 aa)
ubc-21Protein CBR-UBC-21; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
ubc-22Protein CBR-UBC-22. (200 aa)
ubc-20Protein CBR-UBC-20; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
ubq-2Protein CBR-UBQ-2. (128 aa)
ubc-18Protein CBR-UBC-18. (153 aa)
uev-3Protein CBR-UEV-3. (360 aa)
uev-1Protein CBR-UEV-1. (139 aa)
ubc-16Protein CBR-UBC-16. (148 aa)
ari-1.1RBR-type E3 ubiquitin transferase. (494 aa)
ubc-19Protein CBR-UBC-19. (261 aa)
CBG21481Protein CBG21481. (125 aa)
ubc-3Protein CBR-UBC-3; Belongs to the ubiquitin-conjugating enzyme family. (244 aa)
CBG27979Protein CBG27979. (436 aa)
herc-1Protein CBR-HERC-1. (1017 aa)
rfp-1E3 ubiquitin-protein ligase bre-1; E3 ubiquitin-protein ligase that mediates monoubiquitination of 'Lys-117' of histone H2B. H2B 'Lys-117' ubiquitination gives a specific tag for epigenetic transcriptional activation and is also prerequisite for histone H3 'Lys-4' and 'Lys-79' methylation. (828 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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