STRINGSTRING
CBG25066 CBG25066 baz-2 baz-2 CBG01498 CBG01498 htz-1 htz-1 str-81 str-81 CBG01596 CBG01596 CBG02905 CBG02905 rbbp-5 rbbp-5 pis-1 pis-1 madf-3 madf-3 rba-1 rba-1 his-30 his-30 CBG05841 CBG05841 CBG07892 CBG07892 tag-125 tag-125 Cbr-wdr-5.3 Cbr-wdr-5.3 CBG10193 CBG10193 chd-1 chd-1 CBG10818 CBG10818 CBG10822 CBG10822 nurf-1 nurf-1 CBG11115 CBG11115 CBG11116 CBG11116 his-72 his-72 CBG11820 CBG11820 CBG12468 CBG12468 CBG13673 CBG13673 CBG13777 CBG13777 CBG13933 CBG13933 CBG15275 CBG15275 CBG15613 CBG15613 isw-1 isw-1 CBG16769 CBG16769 CBG16771 CBG16771 his-71 his-71 CBG16936 CBG16936 CBG16937 CBG16937 jmjd-3.3.1 jmjd-3.3.1 hat-1 hat-1 CBG18192 CBG18192 cfp-1 cfp-1 CBG19204 CBG19204 CBG19303 CBG19303 CBG19304 CBG19304 CBG20198 CBG20198 hum-5 hum-5 ash-2 ash-2 CBG21076 CBG21076 nap-1 nap-1 chd-7 chd-7 utx-1 utx-1 CBG22677 CBG22677 CBG23013 CBG23013 CBG23011 CBG23011 CBG23443 CBG23443 dpy-30 dpy-30 CBG26344 CBG26344 CBG27565 CBG27565 CBG11090 CBG11090 CBG11091 CBG11091 his-64 his-64 his-63 his-63 CBG03775 CBG03775 CBG01507 CBG01507 CBG01506 CBG01506
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG25066Protein CBG25066. (277 aa)
baz-2Protein CBR-FLT-1. (1439 aa)
CBG01498Histone H2A; Belongs to the histone H2A family. (127 aa)
htz-1Histone H2A; Belongs to the histone H2A family. (142 aa)
str-81Protein CBR-STR-81. (363 aa)
CBG01596Protein CBG01596. (310 aa)
CBG02905Protein CBG02905. (265 aa)
rbbp-5Protein CBG02573. (451 aa)
pis-1Protein CBR-PIS-1. (1052 aa)
madf-3Protein CBR-ATHP-2. (1796 aa)
rba-1Protein CBR-RBA-1. (418 aa)
his-30Histone H2A; Belongs to the histone H2A family. (127 aa)
CBG05841Protein CBG05841. (142 aa)
CBG07892Protein CBG07892. (639 aa)
tag-125WD repeat-containing protein tag-125. (368 aa)
Cbr-wdr-5.3Protein CBR-WDR-5.3. (476 aa)
CBG10193Protein CBG10193. (1044 aa)
chd-1Protein CBR-CHD-1. (1465 aa)
CBG10818Histone H2B; Belongs to the histone H2B family. (123 aa)
CBG10822Histone H2A; Belongs to the histone H2A family. (73 aa)
nurf-1Protein CBR-NURF-1. (1674 aa)
CBG11115Protein CBG11115. (197 aa)
CBG11116Protein CBG11116. (125 aa)
his-72Histone H3; Belongs to the histone H3 family. (136 aa)
CBG11820Protein CBG11820. (130 aa)
CBG12468Protein CBG12468. (142 aa)
CBG13673Protein CBG13673. (233 aa)
CBG13777Protein CBG13777. (253 aa)
CBG13933Protein CBG13933. (1375 aa)
CBG15275Protein CBG15275. (342 aa)
CBG15613Protein CBG15613. (109 aa)
isw-1Protein CBR-ISW-1. (1019 aa)
CBG16769Protein CBG16769. (213 aa)
CBG16771Protein CBG16771. (326 aa)
his-71Histone H3; Belongs to the histone H3 family. (136 aa)
CBG16936Protein CBG16936. (1430 aa)
CBG16937Protein CBG16937. (359 aa)
jmjd-3.3.1Protein CBG17151. (1169 aa)
hat-1Protein CBR-TAG-235. (411 aa)
CBG18192Protein CBG18192. (1998 aa)
cfp-1Protein CBG18764. (609 aa)
CBG19204Protein CBG19204. (137 aa)
CBG19303Histone H2A; Belongs to the histone H2A family. (127 aa)
CBG19304Histone H2B; Belongs to the histone H2B family. (122 aa)
CBG20198Protein CBG20198. (136 aa)
hum-5Protein CBR-HUM-5; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (552 aa)
ash-2Protein CBR-ASH-2. (557 aa)
CBG21076Protein CBG21076. (109 aa)
nap-1Protein CBR-NAP-1; Belongs to the nucleosome assembly protein (NAP) family. (318 aa)
chd-7Protein CBR-TAG-192. (2927 aa)
utx-1Protein CBR-UTX-1. (1155 aa)
CBG22677Protein CBG22677. (88 aa)
CBG23013Protein CBG23013. (283 aa)
CBG23011Protein CBG23011. (329 aa)
CBG23443Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (98 aa)
dpy-30Protein CBR-DPY-30. (123 aa)
CBG26344Protein CBG26344. (129 aa)
CBG27565Protein CBG27565. (120 aa)
CBG11090Protein CBG11090. (508 aa)
CBG11091Protein CBG11091. (421 aa)
his-64Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
his-63Histone H3; Belongs to the histone H3 family. (136 aa)
CBG03775Histone H3; Belongs to the histone H3 family. (136 aa)
CBG01507Histone H2B; Belongs to the histone H2B family. (122 aa)
CBG01506Histone H2A; Belongs to the histone H2A family. (127 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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