STRINGSTRING
uso-1 uso-1 syx-16 syx-16 cpx-2 cpx-2 CBG05584 CBG05584 snap-29 snap-29 syx-2 syx-2 sec-22 sec-22 syx-4 syx-4 ric-4 ric-4 memb-2 memb-2 snap-1 snap-1 syx-7 syx-7 syx-17 syx-17 aex-4 aex-4 syx-3 syx-3 tom-1 tom-1 CBG15059 CBG15059 gos-28 gos-28 ykt-6 ykt-6 memb-1 memb-1 sly-1 sly-1 nsf-1 nsf-1 nbet-1 nbet-1 vti-1 vti-1 vamp-8 vamp-8 snb-2 snb-2 syx-5 syx-5 cpx-1 cpx-1 snb-1 snb-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uso-1Protein CBG01765. (952 aa)
syx-16Protein CBR-SYN-16. (327 aa)
cpx-2Protein CBR-CPX-2. (145 aa)
CBG05584Protein CBG05584. (299 aa)
snap-29Protein CBR-SNAP-29. (277 aa)
syx-2Protein CBR-SYX-2; Belongs to the syntaxin family. (295 aa)
sec-22Protein CBR-SEC-22; Belongs to the synaptobrevin family. (214 aa)
syx-4Protein CBR-SYX-4; Belongs to the syntaxin family. (293 aa)
ric-4Synaptosomal-associated protein; Belongs to the SNAP-25 family. (235 aa)
memb-2Protein CBR-MEMB-2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (216 aa)
snap-1Protein CBR-SNAP-1. (470 aa)
syx-7Protein CBR-SYX-7; Belongs to the syntaxin family. (244 aa)
syx-17Protein CBR-SYX-17. (265 aa)
aex-4Protein CBR-AEX-4. (209 aa)
syx-3Protein CBR-SYX-3; Belongs to the syntaxin family. (305 aa)
tom-1Protein CBR-TOM-1. (1101 aa)
CBG15059Protein CBG15059. (117 aa)
gos-28Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. Cooperates with ykt-6 for proper expression of Golgi-resident proteins. Required along with ykt-6 for normal embryonic development, seam cell division or differentiation, and ray formation (By similarity). (234 aa)
ykt-6Protein CBR-YKT-6; Belongs to the synaptobrevin family. (201 aa)
memb-1Golgi SNAP receptor complex member 2 homolog memb-1; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
sly-1Protein CBG18370; Belongs to the STXBP/unc-18/SEC1 family. (720 aa)
nsf-1Protein CBR-NSF-1. (754 aa)
nbet-1Protein CBR-NBET-1. (106 aa)
vti-1Protein CBR-VTI-1. (221 aa)
vamp-8Protein CBG22395. (113 aa)
snb-2Protein CBR-SNB-2. (114 aa)
syx-5Protein CBR-SYX-5; Belongs to the syntaxin family. (378 aa)
cpx-1Putative complexin-1; Positively regulates a late step in synaptic vesicle exocytosis; Belongs to the complexin/synaphin family. (143 aa)
snb-1Synaptobrevin-1; Involved in the targeting and/or fusion of transport vesicles to their target membrane. Acts in neuronal exocytosis of synaptic transmission. Likely to have a role in cholinergic transmisson. Required for viability, coordinated movement and M3 pharynx motor neuron function (By similarity). (108 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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