(28 nodes) Mixed, incl. START domain, and Lipid transport network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG02249	Protein CBG02249. (365 aa)
	CBG02248	Protein CBG02248. (591 aa)
	CBG03087	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. (311 aa)
	vpr-1	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. (254 aa)
	obr-4	Oxysterol-binding protein; Belongs to the OSBP family. (694 aa)
	strl-1	Protein CBG03834. (241 aa)
	CBG04310	Protein CBG04310. (203 aa)
	CBG05887	Protein CBG05887. (174 aa)
	CBG05711	Protein CBG05711. (664 aa)
	CBG07384	Protein CBG07384. (236 aa)
	hpo-28	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. (569 aa)
	CBG08973	Protein CBG08973. (492 aa)
	gei-1	Protein CBR-GEI-1. (645 aa)
	CBG10833	Protein CBG10833. (156 aa)
	obr-2	Oxysterol-binding protein; Belongs to the OSBP family. (430 aa)
	csnk-1	Protein CBR-CSNK-1; Belongs to the protein kinase superfamily. (460 aa)
	CBG13199	Protein CBG13199. (268 aa)
	obr-1	Oxysterol-binding protein; Belongs to the OSBP family. (762 aa)
	CBG13527	Protein CBG13527. (212 aa)
	CBG15947	Protein CBG15947. (404 aa)
	CBG16873	Protein CBG16873. (208 aa)
	Cbr-tag-340	Protein CBR-TAG-340. (432 aa)
	CBG18166	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. (163 aa)
	CBG18974	Protein CBG18974. (495 aa)
	Cbr-tag-232	Protein CBR-TAG-232. (839 aa)
	CBG21734	Protein CBG21734. (1339 aa)
	CBG23110	Protein CBG23110. (356 aa)
	CBG25883	Protein CBG25883. (536 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG02248	CBG04310	A8WS67	A8WX76	Protein CBG02248.	Protein CBG04310.	0.404
CBG02248	CBG13199	A8WS67	A8XHA0	Protein CBG02248.	Protein CBG13199.	0.872
CBG02248	CBG23110	A8WS67	A8Y4P0	Protein CBG02248.	Protein CBG23110.	0.872
CBG02248	CBG25883	A8WS67	B6IHN8	Protein CBG02248.	Protein CBG25883.	0.728
CBG02248	Cbr-tag-340	A8WS67	A8XSM4	Protein CBG02248.	Protein CBR-TAG-340.	0.865
CBG02248	csnk-1	A8WS67	A8XEZ2	Protein CBG02248.	Protein CBR-CSNK-1; Belongs to the protein kinase superfamily.	0.600
CBG02248	gei-1	A8WS67	A8X9T7	Protein CBG02248.	Protein CBR-GEI-1.	0.728
CBG02248	strl-1	A8WS67	A8WWV5	Protein CBG02248.	Protein CBG03834.	0.871
CBG02248	vpr-1	A8WS67	A8WVZ9	Protein CBG02248.	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	0.404
CBG02249	CBG04310	A8WS66	A8WX76	Protein CBG02249.	Protein CBG04310.	0.404
CBG02249	csnk-1	A8WS66	A8XEZ2	Protein CBG02249.	Protein CBR-CSNK-1; Belongs to the protein kinase superfamily.	0.600
CBG02249	vpr-1	A8WS66	A8WVZ9	Protein CBG02249.	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	0.404
CBG03087	CBG13527	A8WST9	A8XI37	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	Protein CBG13527.	0.408
CBG03087	obr-1	A8WST9	A8XHB1	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	Oxysterol-binding protein; Belongs to the OSBP family.	0.582
CBG04310	CBG02248	A8WX76	A8WS67	Protein CBG04310.	Protein CBG02248.	0.404
CBG04310	CBG02249	A8WX76	A8WS66	Protein CBG04310.	Protein CBG02249.	0.404
CBG04310	CBG13527	A8WX76	A8XI37	Protein CBG04310.	Protein CBG13527.	0.736
CBG04310	CBG15947	A8WX76	A8XNE9	Protein CBG04310.	Protein CBG15947.	0.404
CBG04310	Cbr-tag-340	A8WX76	A8XSM4	Protein CBG04310.	Protein CBR-TAG-340.	0.730
CBG04310	hpo-28	A8WX76	A8X814	Protein CBG04310.	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	0.406