(18 nodes) Peroxisomal transport, and Mpv17/PMP22 network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pmp-4	Protein CBR-PMP-4. (747 aa)
	mspn-1	Protein CBG03401; Belongs to the AAA ATPase family. (341 aa)
	prx-2	Protein CBR-PRX-2. (279 aa)
	prx-14	Protein CBR-PRX-14. (253 aa)
	prx-19	Protein CBR-PRX-19. (286 aa)
	prx-1	Protein CBR-PRX-1. (600 aa)
	CBG07244	Protein CBG07244; Belongs to the AAA ATPase family. (353 aa)
	prx-11	Protein CBR-PRX-11. (214 aa)
	prx-6	Protein CBR-PRX-6. (724 aa)
	prx-5	Protein CBR-PRX-5. (422 aa)
	pmp-2	Protein CBR-PMP-2. (662 aa)
	CBG11177	Protein CBG11177. (41 aa)
	prx-13	Protein CBR-PRX-13. (317 aa)
	CBG14354	Protein CBG14354; Belongs to the peroxisomal membrane protein PXMP2/4 family. (183 aa)
	prx-3	Protein CBR-PRX-3. (363 aa)
	prx-12	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (340 aa)
	CBG24395	Protein CBG24395. (208 aa)
	CBG20693	Mpv17-like protein; Involved in mitochondria homeostasis; Belongs to the peroxisomal membrane protein PXMP2/4 family. (181 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG07244	CBG24395	A8X550	H8WH21	Protein CBG07244; Belongs to the AAA ATPase family.	Protein CBG24395.	0.765
CBG07244	prx-11	A8X550	A8X5E5	Protein CBG07244; Belongs to the AAA ATPase family.	Protein CBR-PRX-11.	0.633
CBG07244	prx-12	A8X550	A8XQV6	Protein CBG07244; Belongs to the AAA ATPase family.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.814
CBG07244	prx-13	A8X550	A8XH41	Protein CBG07244; Belongs to the AAA ATPase family.	Protein CBR-PRX-13.	0.855
CBG07244	prx-14	A8X550	A8X125	Protein CBG07244; Belongs to the AAA ATPase family.	Protein CBR-PRX-14.	0.811
CBG07244	prx-19	A8X550	A8X3A8	Protein CBG07244; Belongs to the AAA ATPase family.	Protein CBR-PRX-19.	0.744
CBG07244	prx-2	A8X550	A8X0W3	Protein CBG07244; Belongs to the AAA ATPase family.	Protein CBR-PRX-2.	0.692
CBG07244	prx-3	A8X550	A8XKT1	Protein CBG07244; Belongs to the AAA ATPase family.	Protein CBR-PRX-3.	0.645
CBG07244	prx-5	A8X550	A8XCG5	Protein CBG07244; Belongs to the AAA ATPase family.	Protein CBR-PRX-5.	0.765
CBG07244	prx-6	A8X550	A8X7F3	Protein CBG07244; Belongs to the AAA ATPase family.	Protein CBR-PRX-6.	0.967
CBG11177	CBG14354	A8XCM3	A8XJT8	Protein CBG11177.	Protein CBG14354; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.437
CBG11177	mspn-1	A8XCM3	A8WUZ0	Protein CBG11177.	Protein CBG03401; Belongs to the AAA ATPase family.	0.633
CBG11177	pmp-4	A8XCM3	A8WMZ0	Protein CBG11177.	Protein CBR-PMP-4.	0.937
CBG11177	prx-11	A8XCM3	A8X5E5	Protein CBG11177.	Protein CBR-PRX-11.	0.572
CBG11177	prx-12	A8XCM3	A8XQV6	Protein CBG11177.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.705
CBG11177	prx-13	A8XCM3	A8XH41	Protein CBG11177.	Protein CBR-PRX-13.	0.721
CBG11177	prx-14	A8XCM3	A8X125	Protein CBG11177.	Protein CBR-PRX-14.	0.682
CBG11177	prx-19	A8XCM3	A8X3A8	Protein CBG11177.	Protein CBR-PRX-19.	0.848
CBG11177	prx-2	A8XCM3	A8X0W3	Protein CBG11177.	Protein CBR-PRX-2.	0.583
CBG11177	prx-3	A8XCM3	A8XKT1	Protein CBG11177.	Protein CBR-PRX-3.	0.772