STRINGSTRING
mtss-1 mtss-1 CBG08481 CBG08481 twnk-1 twnk-1 CBG19284 CBG19284 tofu-1 tofu-1 CBG20918 CBG20918 CBG02742 CBG02742 CBG03697 CBG03697 pif-1 pif-1 CBG21034 CBG21034 hmg-5 hmg-5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mtss-1Protein CBR-MTSS-1. (168 aa)
CBG08481Protein CBG08481. (386 aa)
twnk-1Protein CBG14751. (534 aa)
CBG19284Protein CBG19284. (490 aa)
tofu-1Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance; Belongs to the MGME1 family. (645 aa)
CBG20918Protein CBG20918. (1587 aa)
CBG02742Protein CBG02742; Belongs to the mitochondrial carrier (TC 2.A.29) family. (382 aa)
CBG03697Protein CBG03697. (249 aa)
pif-1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (683 aa)
CBG21034Protein CBG21034. (854 aa)
hmg-5Protein CBR-HMG-5. (198 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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