STRINGSTRING
syp-3 syp-3 rec-8 rec-8 scc-1 scc-1 syp-2 syp-2 syp-1 syp-1 him-3 him-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
syp-3Protein CBR-SYP-3. (216 aa)
rec-8Protein CBR-REC-8. (844 aa)
scc-1Protein CBR-SCC-1. (633 aa)
syp-2Protein CBR-SYP-2. (190 aa)
syp-1Protein CBR-SYP-1. (494 aa)
him-3Protein CBR-HIM-3. (235 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.