STRINGSTRING
hop-1 hop-1 sup-17 sup-17 CBG12386 CBG12386 pen-2 pen-2 mib-1 mib-1 dsl-3 dsl-3 Cbr-nhr-146 Cbr-nhr-146 aph-1 aph-1 lag-2 lag-2 CBG13578 CBG13578 CBG13949 CBG13949 CBG14147 CBG14147 osm-11 osm-11 adm-4 adm-4 spe-4 spe-4 CBG19473 CBG19473 aph-2 aph-2 dsl-1 dsl-1 CBG24197 CBG24197 CBG24198 CBG24198 lag-1 lag-1 lip-1 lip-1 glp-1 glp-1 lin-12.2 lin-12.2 CBG06829 CBG06829 lin-12.1 lin-12.1 CBG07064 CBG07064 sel-12 sel-12 dsl-7 dsl-7 sao-1 sao-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hop-1Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (358 aa)
sup-17Protein CBR-SUP-17. (920 aa)
CBG12386Protein CBG12386. (2855 aa)
pen-2Protein CBR-PEN-2. (101 aa)
mib-1Protein CBR-MIB-1. (766 aa)
dsl-3Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (259 aa)
Cbr-nhr-146Protein CBG13577. (196 aa)
aph-1Protein CBR-APH-1. (330 aa)
lag-2Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (392 aa)
CBG13578Protein CBG13578. (340 aa)
CBG13949Protein CBG13949. (167 aa)
CBG14147Protein CBG14147; Belongs to the syntaxin family. (523 aa)
osm-11Protein CBR-OSM-11. (188 aa)
adm-4Protein CBR-ADM-4. (701 aa)
spe-4Protein CBR-SPE-4. (483 aa)
CBG19473Protein CBG19473. (96 aa)
aph-2Protein CBR-APH-2. (721 aa)
dsl-1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (257 aa)
CBG24197Protein CBG24197. (188 aa)
CBG24198Protein CBG24198. (188 aa)
lag-1Protein CBR-LAG-1. (681 aa)
lip-1Protein CBR-LIP-1. (376 aa)
glp-1Protein CBR-GLP-1. (1326 aa)
lin-12.2Protein CBR-LIN-12. (1392 aa)
CBG06829Protein CBG06829. (987 aa)
lin-12.1Protein CBG06951. (1359 aa)
CBG07064Protein CBG07064. (477 aa)
sel-12Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (450 aa)
dsl-7Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (325 aa)
sao-1Protein CBG11416. (253 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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