(25 nodes) Regulation of lipid storage network (Caenorhabditis briggsae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mgl-3	Protein CBR-MGL-3. (1046 aa)
	daf-2	Protein CBR-DAF-2. (1840 aa)
	sams-1	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (404 aa)
	CBG15143	Protein CBG15143. (250 aa)
	nog-1	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
	CBG15354	Protein CBG15354. (182 aa)
	sbp-1	Protein CBR-SBP-1. (1142 aa)
	prmt-1	Protein CBR-PRMT-1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (345 aa)
	daf-16	Protein CBR-DAF-16. (497 aa)
	mif-3	Protein CBR-MIF-3. (146 aa)
	dhs-28	Protein CBR-DHS-28; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (448 aa)
	CBG00605	Protein CBG00605. (235 aa)
	CBG00559	Protein CBG00559. (347 aa)
	mgl-1	Protein CBR-MGL-1. (963 aa)
	CBG02630	Protein CBG02630. (578 aa)
	tpp-2	Protein CBG02572. (1374 aa)
	CBG06325	Protein CBG06325. (223 aa)
	ltah-1.2	Protein CBG08301. (625 aa)
	CBG26753	Protein CBG26753. (147 aa)
	pptr-1	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (531 aa)
	CBG22233	Protein CBG22233. (400 aa)
	CBG21688	Protein CBG21688. (239 aa)
	CBG21698	Protein CBG21698. (233 aa)
	Cbr-tag-164	Protein CBR-TAG-164. (267 aa)
	daf-22	Protein CBG20965; Belongs to the thiolase-like superfamily. Thiolase family. (372 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG00559	ltah-1.2	A8WNL2	A8X691	Protein CBG00559.	Protein CBG08301.	0.778
Cbr-tag-164	nog-1	A8XZM4	A8XI08	Protein CBR-TAG-164.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.713
daf-16	daf-2	A8XFP9	A8XMN1	Protein CBR-DAF-16.	Protein CBR-DAF-2.	0.996
daf-16	pptr-1	A8XFP9	A8Y342	Protein CBR-DAF-16.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.476
daf-16	prmt-1	A8XFP9	A8XGN2	Protein CBR-DAF-16.	Protein CBR-PRMT-1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.968
daf-16	sbp-1	A8XFP9	A8XHH0	Protein CBR-DAF-16.	Protein CBR-SBP-1.	0.725
daf-2	daf-16	A8XMN1	A8XFP9	Protein CBR-DAF-2.	Protein CBR-DAF-16.	0.996
daf-2	pptr-1	A8XMN1	A8Y342	Protein CBR-DAF-2.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.477
daf-2	sbp-1	A8XMN1	A8XHH0	Protein CBR-DAF-2.	Protein CBR-SBP-1.	0.578
daf-22	dhs-28	A8XZ23	A8XC82	Protein CBG20965; Belongs to the thiolase-like superfamily. Thiolase family.	Protein CBR-DHS-28; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.994
dhs-28	daf-22	A8XC82	A8XZ23	Protein CBR-DHS-28; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Protein CBG20965; Belongs to the thiolase-like superfamily. Thiolase family.	0.994
ltah-1.2	CBG00559	A8X691	A8WNL2	Protein CBG08301.	Protein CBG00559.	0.778
mgl-1	mgl-3	A8WRN3	A8XWS2	Protein CBR-MGL-1.	Protein CBR-MGL-3.	0.472
mgl-3	mgl-1	A8XWS2	A8WRN3	Protein CBR-MGL-3.	Protein CBR-MGL-1.	0.472
nog-1	Cbr-tag-164	A8XI08	A8XZM4	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Protein CBR-TAG-164.	0.713
nog-1	prmt-1	A8XI08	A8XGN2	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Protein CBR-PRMT-1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.713
pptr-1	daf-16	A8Y342	A8XFP9	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	Protein CBR-DAF-16.	0.476
pptr-1	daf-2	A8Y342	A8XMN1	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	Protein CBR-DAF-2.	0.477
prmt-1	daf-16	A8XGN2	A8XFP9	Protein CBR-PRMT-1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Protein CBR-DAF-16.	0.968
prmt-1	nog-1	A8XGN2	A8XI08	Protein CBR-PRMT-1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.713