STRINGSTRING
CBG02630 CBG02630 dhs-28 dhs-28 nog-1 nog-1 sams-1 sams-1 daf-2 daf-2 daf-22 daf-22
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG02630Protein CBG02630. (578 aa)
dhs-28Protein CBR-DHS-28; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (448 aa)
nog-1Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
sams-1S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (404 aa)
daf-2Protein CBR-DAF-2. (1840 aa)
daf-22Protein CBG20965; Belongs to the thiolase-like superfamily. Thiolase family. (372 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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