STRINGSTRING
hrg-4 hrg-4 hrg-5 hrg-5 CBG12481 CBG12481 hmt-1 hmt-1 hrg-1 hrg-1 hrg-6 hrg-6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hrg-4Protein CBG05989. (172 aa)
hrg-5Protein CBG05988. (141 aa)
CBG12481Protein CBG12481. (591 aa)
hmt-1Protein CBR-HMT-1. (700 aa)
hrg-1Protein CBG14327. (193 aa)
hrg-6Protein CBG05990. (161 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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