STRINGSTRING
erg-28 erg-28 drd-1 drd-1 CBG00643 CBG00643 arv-1 arv-1 CBG01781 CBG01781 tat-4 tat-4 CBG02558 CBG02558 dhcr-7 dhcr-7 CBG05606 CBG05606 CBG07887 CBG07887 daf-36 daf-36 hmgs-1 hmgs-1 dhs-16 dhs-16 CBG10440 CBG10440 tat-2 tat-2 hosl-1 hosl-1 daf-9 daf-9 hmgr-1 hmgr-1 strm-1 strm-1 hsd-1 hsd-1 mboa-1 mboa-1 tat-3 tat-3 hpo-19 hpo-19 CBG18938 CBG18938 CBG20661 CBG20661 mvk-1 mvk-1 CBG26438 CBG26438 CBG27070 CBG27070 CBG14675 CBG14675
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
erg-28Protein CBG08525. (165 aa)
drd-1Protein CBG00644; Belongs to the sterol desaturase family. (269 aa)
CBG00643Protein CBG00643; Belongs to the sterol desaturase family. (286 aa)
arv-1Protein CBG00899. (241 aa)
CBG01781NADPH:adrenodoxin oxidoreductase, mitochondrial. (456 aa)
tat-4Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1235 aa)
CBG02558Protein CBG02558. (198 aa)
dhcr-7Protein CBR-DHCR-7. (457 aa)
CBG05606Protein CBG05606. (191 aa)
CBG07887Protein CBG07887. (365 aa)
daf-36Protein CBR-DAF-36. (430 aa)
hmgs-13-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (463 aa)
dhs-16Protein CBR-DHS-16. (387 aa)
CBG10440Protein CBG10440; Belongs to the cytochrome P450 family. (556 aa)
tat-2Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1526 aa)
hosl-1Protein CBG14512. (828 aa)
daf-9Protein CBR-DAF-9; Belongs to the cytochrome P450 family. (614 aa)
hmgr-13-hydroxy-3-methylglutaryl coenzyme A reductase. (555 aa)
strm-1Protein CBG15658; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family. (338 aa)
hsd-1Protein CBR-HSD-1; Belongs to the 3-beta-HSD family. (354 aa)
mboa-1O-acyltransferase. (464 aa)
tat-3Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1402 aa)
hpo-19NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (309 aa)
CBG18938NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (305 aa)
CBG20661Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (372 aa)
mvk-1Protein CBR-MVK-1. (715 aa)
CBG26438Protein CBG26438. (200 aa)
CBG27070Protein CBG27070. (140 aa)
CBG14675Cholesterol 25-hydroxylase-like protein; Probable sterol desaturase. (300 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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