STRINGSTRING
mel-32 mel-32 CBG25505 CBG25505 aars-2 aars-2 sesn-1 sesn-1 gldc-1 gldc-1 aars-1 aars-1 pyr-1 pyr-1 CBG02946 CBG02946 CBG10121 CBG10121
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mel-32Serine hydroxymethyltransferase; Interconversion of serine and glycine. (511 aa)
CBG25505Protein CBG25505. (207 aa)
aars-2Protein CBR-AARS-2; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (967 aa)
sesn-1Protein CBG03915. (557 aa)
gldc-1Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (985 aa)
aars-1Protein CBR-AARS-1; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (807 aa)
pyr-1Protein CBR-PYR-1. (2090 aa)
CBG02946Protein CBG02946. (723 aa)
CBG10121Protein CBG10121. (979 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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