STRINGSTRING
alh-3 alh-3 dao-3 dao-3 CBG16221 CBG16221 aass-1 aass-1 CBG12961 CBG12961 mthf-1 mthf-1 dhfr-1 dhfr-1 qdpr-1 qdpr-1 CBG05881 CBG05881
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
alh-310-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. (923 aa)
dao-3Protein CBR-DAO-3. (301 aa)
CBG16221Protein CBG16221. (279 aa)
aass-1Protein CBG13546. (934 aa)
CBG12961Protein CBG12961. (278 aa)
mthf-1Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (724 aa)
dhfr-1Protein CBG12356; Belongs to the dihydrofolate reductase family. (189 aa)
qdpr-1Protein CBR-QDPR-1. (236 aa)
CBG05881Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. (298 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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