STRINGSTRING
CBG06906 CBG06906 msra-1 msra-1 trx-4 trx-4 CBG07974 CBG07974 CBG02950 CBG02950 CBG03285 CBG03285 pqn-48 pqn-48 dnj-27 dnj-27 CBG03282 CBG03282 CBG18077 CBG18077 CBG18106 CBG18106
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG06906Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. (152 aa)
msra-1Protein CBG13148. (207 aa)
trx-4Thioredoxin; Belongs to the thioredoxin family. (107 aa)
CBG07974Protein CBG07974. (182 aa)
CBG02950Protein CBG02950. (267 aa)
CBG03285Protein CBG03285. (235 aa)
pqn-48Protein CBR-PQN-48. (339 aa)
dnj-27Protein CBR-DNJ-27. (783 aa)
CBG03282GILT-like protein CBG03282. (220 aa)
CBG18077Protein CBG18077. (186 aa)
CBG18106Protein CBG18106. (264 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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