STRINGSTRING
CBG13739 CBG13739 CBG07184 CBG07184 CBG07192 CBG07192 haly-1 haly-1 CBG00666 CBG00666 CBG12517 CBG12517
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG13739Protein CBG13739. (305 aa)
CBG07184Protein CBG07184. (194 aa)
CBG07192Protein CBG07192. (187 aa)
haly-1Histidine ammonia-lyase; Belongs to the PAL/histidase family. (747 aa)
CBG00666Protein CBG00666. (502 aa)
CBG12517Protein CBG12517. (325 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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