STRINGSTRING
CBG13258 CBG13258 pyr-1 pyr-1 asns-1 asns-1 gmps-1 gmps-1 qns-1 qns-1 CBG06229 CBG06229 CBG08395 CBG08395 CBG15106 CBG15106 CBG15105 CBG15105 CBG15269 CBG15269 asns-2 asns-2 pfas-1 pfas-1 CBG25505 CBG25505
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG13258Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family. (132 aa)
pyr-1Protein CBR-PYR-1. (2090 aa)
asns-1Protein CBR-ASNS-1. (572 aa)
gmps-1Protein CBG03001. (808 aa)
qns-1Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family. (703 aa)
CBG06229Protein CBG06229. (477 aa)
CBG08395Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily. (447 aa)
CBG15106Protein CBG15106. (276 aa)
CBG15105Protein CBG15105. (180 aa)
CBG15269Protein CBG15269. (257 aa)
asns-2Protein CBR-ASNS-2. (567 aa)
pfas-1Protein CBG18026. (1337 aa)
CBG25505Protein CBG25505. (207 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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