STRINGSTRING
daf-7 daf-7 daf-3 daf-3 dhs-28 dhs-28 snet-1 snet-1 CBG16204 CBG16204 CBG17275 CBG17275 daf-22 daf-22 srx-43 srx-43 daf-11 daf-11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
daf-7Protein CBR-DAF-7. (376 aa)
daf-3Dwarfin sma. (1043 aa)
dhs-28Protein CBR-DHS-28; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (448 aa)
snet-1Protein CBR-SNET-1. (102 aa)
CBG16204Protein CBG16204. (443 aa)
CBG17275Protein CBG17275. (502 aa)
daf-22Protein CBG20965; Belongs to the thiolase-like superfamily. Thiolase family. (372 aa)
srx-43Protein CBR-SRX-43. (282 aa)
daf-11Guanylate cyclase. (1277 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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