(14 nodes) Triglyceride biosynthetic process network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	acl-5	Protein CBR-ACL-5. (515 aa)
	acl-6	Protein CBR-ACL-6; Belongs to the GPAT/DAPAT family. (748 aa)
	CBG22471	Protein CBG22471. (340 aa)
	mboa-2	O-acyltransferase. (495 aa)
	pck-2	Protein CBG08279. (653 aa)
	CBG11513	Protein CBG11513. (463 aa)
	lpin-1	Protein CBG11512. (804 aa)
	acl-4	Protein CBR-ACL-4. (628 aa)
	dgtr-1	Protein CBR-DGTR-1. (359 aa)
	CBG19252	Protein CBG19252. (339 aa)
	CBG22470	Protein CBG22470. (292 aa)
	pck-3	Protein CBG06707. (584 aa)
	dgat-2	Protein CBG05683. (345 aa)
	pck-1	Protein CBG00466. (648 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG11513	CBG19252	A8XCT7	A8XV70	Protein CBG11513.	Protein CBG19252.	0.936
CBG11513	dgtr-1	A8XCT7	A8XUE9	Protein CBG11513.	Protein CBR-DGTR-1.	0.936
CBG11513	lpin-1	A8XCT7	A8XCT8	Protein CBG11513.	Protein CBG11512.	0.902
CBG11513	mboa-2	A8XCT7	A8Y4P3	Protein CBG11513.	O-acyltransferase.	0.946
CBG19252	CBG11513	A8XV70	A8XCT7	Protein CBG19252.	Protein CBG11513.	0.936
CBG19252	dgtr-1	A8XV70	A8XUE9	Protein CBG19252.	Protein CBR-DGTR-1.	0.915
CBG19252	lpin-1	A8XV70	A8XCT8	Protein CBG19252.	Protein CBG11512.	0.936
CBG19252	mboa-2	A8XV70	A8Y4P3	Protein CBG19252.	O-acyltransferase.	0.986
CBG22470	mboa-2	A8Y2D1	A8Y4P3	Protein CBG22470.	O-acyltransferase.	0.837
CBG22471	mboa-2	A8Y2D2	A8Y4P3	Protein CBG22471.	O-acyltransferase.	0.685
acl-4	acl-5	A8XJC1	A8XQJ9	Protein CBR-ACL-4.	Protein CBR-ACL-5.	0.915
acl-4	acl-6	A8XJC1	A8X974	Protein CBR-ACL-4.	Protein CBR-ACL-6; Belongs to the GPAT/DAPAT family.	0.640
acl-4	lpin-1	A8XJC1	A8XCT8	Protein CBR-ACL-4.	Protein CBG11512.	0.467
acl-5	acl-4	A8XQJ9	A8XJC1	Protein CBR-ACL-5.	Protein CBR-ACL-4.	0.915
acl-5	acl-6	A8XQJ9	A8X974	Protein CBR-ACL-5.	Protein CBR-ACL-6; Belongs to the GPAT/DAPAT family.	0.781
acl-6	acl-4	A8X974	A8XJC1	Protein CBR-ACL-6; Belongs to the GPAT/DAPAT family.	Protein CBR-ACL-4.	0.640
acl-6	acl-5	A8X974	A8XQJ9	Protein CBR-ACL-6; Belongs to the GPAT/DAPAT family.	Protein CBR-ACL-5.	0.781
dgat-2	mboa-2	A8X0F7	A8Y4P3	Protein CBG05683.	O-acyltransferase.	0.826
dgtr-1	CBG11513	A8XUE9	A8XCT7	Protein CBR-DGTR-1.	Protein CBG11513.	0.936
dgtr-1	CBG19252	A8XUE9	A8XV70	Protein CBR-DGTR-1.	Protein CBG19252.	0.915