(7 nodes) Taurine metabolic process network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG10454	Protein CBG10454. (432 aa)
	CBG10455	Protein CBG10455. (252 aa)
	cdo-1	Cysteine dioxygenase; Belongs to the cysteine dioxygenase family. (190 aa)
	CBG20736	Protein CBG20736; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (322 aa)
	CBG10451	Protein CBG10451. (415 aa)
	CBG10452	Protein CBG10452. (428 aa)
	CBG10453	Protein CBG10453. (428 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG10451	CBG10452	A8XB90	A8XB91	Protein CBG10451.	Protein CBG10452.	0.901
CBG10451	CBG10453	A8XB90	A8XB92	Protein CBG10451.	Protein CBG10453.	0.901
CBG10451	CBG10454	A8XB90	A8XB93	Protein CBG10451.	Protein CBG10454.	0.902
CBG10452	CBG10451	A8XB91	A8XB90	Protein CBG10452.	Protein CBG10451.	0.901
CBG10452	CBG10453	A8XB91	A8XB92	Protein CBG10452.	Protein CBG10453.	0.900
CBG10452	CBG10454	A8XB91	A8XB93	Protein CBG10452.	Protein CBG10454.	0.902
CBG10453	CBG10451	A8XB92	A8XB90	Protein CBG10453.	Protein CBG10451.	0.901
CBG10453	CBG10452	A8XB92	A8XB91	Protein CBG10453.	Protein CBG10452.	0.900
CBG10453	CBG10454	A8XB92	A8XB93	Protein CBG10453.	Protein CBG10454.	0.902
CBG10454	CBG10451	A8XB93	A8XB90	Protein CBG10454.	Protein CBG10451.	0.902
CBG10454	CBG10452	A8XB93	A8XB91	Protein CBG10454.	Protein CBG10452.	0.902
CBG10454	CBG10453	A8XB93	A8XB92	Protein CBG10454.	Protein CBG10453.	0.902