STRINGSTRING
git-1 git-1 bris-1 bris-1 CBG11238 CBG11238 CBG12524 CBG12524 gbf-1 gbf-1 efa-6 efa-6 agef-1 agef-1 CBG21340 CBG21340 grp-1 grp-1 CBG13515 CBG13515
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
git-1Protein CBR-GIT-1. (659 aa)
bris-1Protein CBG10729. (621 aa)
CBG11238Protein CBG11238. (1525 aa)
CBG12524Protein CBG12524. (421 aa)
gbf-1Protein CBR-GBF-1. (1990 aa)
efa-6Protein CBR-EFA-6. (836 aa)
agef-1Protein CBR-AGEF-1. (1619 aa)
CBG21340Protein CBG21340. (1656 aa)
grp-1Protein CBR-GRP-1. (362 aa)
CBG13515Protein CBG13515. (589 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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