(29 nodes) Myofilament network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mlc-3	Protein CBR-MLC-3. (153 aa)
	tni-3	Protein CBR-TNI-3. (262 aa)
	CBG24443	Protein CBG24443. (93 aa)
	CBG24445	Protein CBG24445. (368 aa)
	anmt-1	Protein CBG00588. (283 aa)
	CBG02162	Protein CBG02162. (372 aa)
	unc-94	Protein CBR-UNC-94. (406 aa)
	CBG03773	Protein CBG03773. (272 aa)
	mup-2	Protein CBR-MUP-2. (421 aa)
	unc-60	Protein CBR-UNC-60; Belongs to the actin-binding proteins ADF family. (293 aa)
	unc-96	Protein CBR-UNC-96. (404 aa)
	tnt-4	Protein CBR-TNT-4. (308 aa)
	unc-87	Protein CBR-UNC-87. (547 aa)
	CBG14574	Protein CBG14574. (324 aa)
	unc-27	Protein CBR-UNC-27. (238 aa)
	tnt-2	Protein CBR-TNT-2. (426 aa)
	CBG16049	Protein CBG16049. (320 aa)
	CBG16669	Protein CBG16669. (199 aa)
	tnt-3	Protein CBR-TNT-3. (1198 aa)
	tni-1	Protein CBR-TNI-1. (247 aa)
	unc-54	Protein CBR-UNC-54; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2004 aa)
	tni-4	Protein CBR-TNI-4. (194 aa)
	myo-1	Protein CBR-LET-75; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2121 aa)
	atn-1	Protein CBR-ATN-1. (894 aa)
	act-4	Protein CBG23090. (376 aa)
	CBG26587	Protein CBG26587. (599 aa)
	CBG27036	Protein CBG27036. (133 aa)
	CBG29119	Protein CBG29119. (274 aa)
	vab-8	Kinesin-like protein vab-8; Required for posterior migration of cells and axon growth cones during nervous system assembly (By similarity). In PLM neuron, regulates innexin unc-9 gap junction turnover by suppressing unc-9 transport out of the gap junctions (By similarity). Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIF26 subfamily. (1069 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG02162	atn-1	A8WS33	A8Y3R8	Protein CBG02162.	Protein CBR-ATN-1.	0.595
CBG02162	mlc-3	A8WS33	A8WJV7	Protein CBG02162.	Protein CBR-MLC-3.	0.576
CBG02162	unc-54	A8WS33	A8XWG4	Protein CBG02162.	Protein CBR-UNC-54; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.410
CBG02162	unc-60	A8WS33	A8X2K2	Protein CBG02162.	Protein CBR-UNC-60; Belongs to the actin-binding proteins ADF family.	0.540
CBG02162	unc-94	A8WS33	A8WVR8	Protein CBG02162.	Protein CBR-UNC-94.	0.475
CBG03773	CBG16049	A8WWP5	A8XN75	Protein CBG03773.	Protein CBG16049.	0.744
CBG03773	anmt-1	A8WWP5	A8WNI6	Protein CBG03773.	Protein CBG00588.	0.641
CBG03773	mlc-3	A8WWP5	A8WJV7	Protein CBG03773.	Protein CBR-MLC-3.	0.597
CBG03773	tni-3	A8WWP5	A8WKJ1	Protein CBG03773.	Protein CBR-TNI-3.	0.534
CBG14574	atn-1	A8XK80	A8Y3R8	Protein CBG14574.	Protein CBR-ATN-1.	0.595
CBG14574	mlc-3	A8XK80	A8WJV7	Protein CBG14574.	Protein CBR-MLC-3.	0.576
CBG14574	unc-54	A8XK80	A8XWG4	Protein CBG14574.	Protein CBR-UNC-54; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.410
CBG14574	unc-60	A8XK80	A8X2K2	Protein CBG14574.	Protein CBR-UNC-60; Belongs to the actin-binding proteins ADF family.	0.540
CBG14574	unc-94	A8XK80	A8WVR8	Protein CBG14574.	Protein CBR-UNC-94.	0.475
CBG16049	CBG03773	A8XN75	A8WWP5	Protein CBG16049.	Protein CBG03773.	0.744
CBG16049	anmt-1	A8XN75	A8WNI6	Protein CBG16049.	Protein CBG00588.	0.642
CBG16049	tni-3	A8XN75	A8WKJ1	Protein CBG16049.	Protein CBR-TNI-3.	0.524
CBG16669	mup-2	A8XPA0	A8WZ28	Protein CBG16669.	Protein CBR-MUP-2.	0.705
CBG16669	tni-1	A8XPA0	A8XQV8	Protein CBG16669.	Protein CBR-TNI-1.	0.611
CBG16669	tni-3	A8XPA0	A8WKJ1	Protein CBG16669.	Protein CBR-TNI-3.	0.611