STRINGSTRING
hmg-5 hmg-5 mrt-1.2 mrt-1.2 clk-2 clk-2 cku-70 cku-70 smg-6 smg-6 ceh-37 ceh-37 pot-1 pot-1 cku-80 cku-80 hmbx-1 hmbx-1 mrt-1.1 mrt-1.1 rad-50 rad-50 rpa-1 rpa-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hmg-5Protein CBR-HMG-5. (198 aa)
mrt-1.2Protein CBG08727. (600 aa)
clk-2Protein CBR-CLK-2. (895 aa)
cku-70Protein CBR-CKU-70. (680 aa)
smg-6Protein CBR-SMG-6. (773 aa)
ceh-37Protein CBR-CEH-37. (287 aa)
pot-1Protein CBR-POT-1. (349 aa)
cku-80ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. (720 aa)
hmbx-1Protein CBR-HMBX-1. (422 aa)
mrt-1.1Protein CBG22248. (624 aa)
rad-50Protein CBR-RAD-50. (1354 aa)
rpa-1Probable replication factor A 73 kDa subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (658 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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