STRINGSTRING
gipc-2 gipc-2 ubxn-1 ubxn-1 cri-2 cri-2 timp-1 timp-1 CBG12233 CBG12233 gei-17 gei-17 ubh-4 ubh-4 daf-2 daf-2 CBG00290 CBG00290 CBG03022 CBG03022
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gipc-2Protein CBG17992. (363 aa)
ubxn-1Protein CBR-UBXN-1. (305 aa)
cri-2Protein CBR-TAG-225. (158 aa)
timp-1Protein CBG11325. (152 aa)
CBG12233Protein CBG12233. (224 aa)
gei-17Protein CBR-GEI-17. (675 aa)
ubh-4Ubiquitin carboxyl-terminal hydrolase. (326 aa)
daf-2Protein CBR-DAF-2. (1840 aa)
CBG00290Protein CBG00290. (336 aa)
CBG03022Protein CBG03022. (1515 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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