(7 nodes) Regulation of fatty acid biosynthetic process network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	adpr-1	Protein CBR-ADPR-1. (533 aa)
	CBG22161	Protein CBG22161. (153 aa)
	mxl-3	Protein CBR-MXL-3. (242 aa)
	brc-1	Protein CBR-BRC-1. (498 aa)
	dbt-1	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (482 aa)
	bckd-1b	Protein CBR-TAG-173. (221 aa)
	CBG00293	Protein CBG00293. (158 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG00293	bckd-1b	E3CTV2	A8WMM6	Protein CBG00293.	Protein CBR-TAG-173.	0.598
CBG00293	dbt-1	E3CTV2	A8WSE0	Protein CBG00293.	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	0.965
CBG22161	adpr-1	A8Y1P2	A8Y1P4	Protein CBG22161.	Protein CBR-ADPR-1.	0.542
adpr-1	CBG22161	A8Y1P4	A8Y1P2	Protein CBR-ADPR-1.	Protein CBG22161.	0.542
bckd-1b	CBG00293	A8WMM6	E3CTV2	Protein CBR-TAG-173.	Protein CBG00293.	0.598
bckd-1b	dbt-1	A8WMM6	A8WSE0	Protein CBR-TAG-173.	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	0.962
dbt-1	CBG00293	A8WSE0	E3CTV2	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	Protein CBG00293.	0.965
dbt-1	bckd-1b	A8WSE0	A8WMM6	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	Protein CBR-TAG-173.	0.962