STRINGSTRING
sesn-1 sesn-1 lmtr-5 lmtr-5 lmtr-3 lmtr-3 daf-15 daf-15 deg-1 deg-1 eak-7 eak-7 che-1 che-1 mel-26 mel-26 lmtr-2 lmtr-2 ragc-1 ragc-1 gcy-22 gcy-22 raga-1 raga-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sesn-1Protein CBG03915. (557 aa)
lmtr-5Protein CBG25826. (95 aa)
lmtr-3Protein CBG23109. (147 aa)
daf-15Protein CBR-DAF-15. (1795 aa)
deg-1Protein CBR-DEG-1; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (787 aa)
eak-7Protein CBR-EAK-7. (397 aa)
che-1Protein CBR-CHE-1. (281 aa)
mel-26Protein CBR-MEL-26. (394 aa)
lmtr-2Protein CBG11395. (124 aa)
ragc-1Protein CBR-RAGC-1. (338 aa)
gcy-22Guanylate cyclase. (1076 aa)
raga-1Protein CBR-RAGA-1. (312 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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