STRINGSTRING
psmd-9 psmd-9 CBG15320 CBG15320 rpn-6.1 rpn-6.1 CBG18387 CBG18387 CBG18037 CBG18037 CBG19071 CBG19071 rpn-13 rpn-13 CBG19694 CBG19694 dss-1 dss-1 CBG25234 CBG25234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psmd-9Protein CBG11181. (196 aa)
CBG15320Protein CBG15320. (429 aa)
rpn-6.1Protein CBR-RPN-6.1. (404 aa)
CBG18387Protein CBG18387. (1807 aa)
CBG18037Protein CBG18037. (490 aa)
CBG19071Protein CBG19071. (130 aa)
rpn-13Protein CBG19693. (375 aa)
CBG19694Protein CBG19694. (143 aa)
dss-1Probable 26S proteasome complex subunit dss-1; Subunit of the 26S proteasome which plays a role in ubiquitin-dependent proteolysis. Has an essential role in oogenesis and larval growth. Required for intestinal function and default lifespan (By similarity). (76 aa)
CBG25234Protein CBG25234. (347 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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